AT1G72210

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG_01_0000509 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000509_tree ,
OG_02_0000283 (LandPlants) Phylogenetic Tree(s): OG_02_0000283_tree ,
OG_03_0000646 (SeedPlants) Phylogenetic Tree(s): OG_03_0000646_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G72210
Cluster	HCCA: Cluster_262

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01021074001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.03	Archaeplastida
LOC_Os02g46560.1	No alias	transcription factor (bHLH)	0.04	Archaeplastida
LOC_Os10g23050.1	No alias	transcription factor (bHLH)	0.02	Archaeplastida
Solyc12g087850.3.1	No alias	transcription factor (bHLH)	0.01	Archaeplastida
Zm00001e009989_P001	No alias	transcription factor (bHLH)	0.02	Archaeplastida
Zm00001e023271_P001	No alias	transcription factor (bHLH)	0.02	Archaeplastida
Zm00001e024824_P001	No alias	transcription factor (bHLH)	0.03	Archaeplastida
Zm00001e041403_P001	No alias	transcription factor (bHLH)	0.03	Archaeplastida
LOC_Os02g46560.1	No alias	transcription factor (bHLH)	0.04	LandPlants
Solyc03g007410.4.1	No alias	transcription factor (bHLH)	0.02	LandPlants
Zm00001e009989_P001	No alias	transcription factor (bHLH)	0.02	LandPlants
Zm00001e014279_P001	No alias	transcription factor (bHLH)	0.02	LandPlants
Zm00001e023271_P001	No alias	transcription factor (bHLH)	0.02	LandPlants
Zm00001e024824_P001	No alias	transcription factor (bHLH)	0.03	LandPlants
Zm00001e037075_P001	No alias	transcription factor (bHLH)	0.02	LandPlants
Zm00001e041403_P001	No alias	transcription factor (bHLH)	0.03	LandPlants
GSVIVT01000012001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.02	SeedPlants
LOC_Os02g46560.1	No alias	transcription factor (bHLH)	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	123	174

External Links

No external refs found!