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  5. Solyc04g078690.3.1

Solyc04g078690.3.1


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078690.3.1
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
LOC_Os06g10820.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_10287127g0010 No alias transcription factor (bHLH). PIF red/far-red light... 0.01 Archaeplastida
MA_167128g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c27_8050V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Pp3c4_24380V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.01 Archaeplastida
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 Archaeplastida
Zm00001e034339_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.02 LandPlants
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
GSVIVT01031338001 No alias External stimuli response.light.red/far red light.PIF... 0.02 LandPlants
Zm00001e005046_P003 No alias transcription factor (bHLH). PIF red/far-red light... 0.02 LandPlants
GSVIVT01031338001 No alias External stimuli response.light.red/far red light.PIF... 0.02 SeedPlants
Solyc01g102300.3.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 138 184
No external refs found!