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  5. Solyc04g078420.1.1

Solyc04g078420.1.1


Description : transcription factor (MYB)


Gene families : OG_01_0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000116 (LandPlants) Phylogenetic Tree(s): OG_02_0000116_tree ,
OG_03_0000157 (SeedPlants) Phylogenetic Tree(s): OG_03_0000157_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g078420.1.1
Cluster HCCA: Cluster_25

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00219710 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00007p00169630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00022p00252530 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00024p00224470 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.02 Archaeplastida
AMTR_s00024p00225650 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AMTR_s00056p00204920 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00079p00140660 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00139p00079430 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AT1G74650 ATMYB31, MYB31, ATY13 myb domain protein 31 0.03 Archaeplastida
AT2G13960 No alias Homeodomain-like superfamily protein 0.04 Archaeplastida
AT3G01530 MYB57, ATMYB57 myb domain protein 57 0.03 Archaeplastida
AT3G06490 BOS1, AtMYB108, MYB108 myb domain protein 108 0.06 Archaeplastida
AT3G08500 AtMYB83, MYB83 myb domain protein 83 0.02 Archaeplastida
AT3G27810 ATMYB21, MYB21, ATMYB3 myb domain protein 21 0.02 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT4G13480 AtMYB79, MYB79 myb domain protein 79 0.05 Archaeplastida
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.04 Archaeplastida
AT5G12870 ATMYB46, MYB46 myb domain protein 46 0.03 Archaeplastida
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.06 Archaeplastida
Cre02.g108350 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01000219001 No alias No description available 0.05 Archaeplastida
GSVIVT01000232001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.14 Archaeplastida
GSVIVT01003662001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01007740001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.07 Archaeplastida
GSVIVT01007981001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01016767001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01018234001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
GSVIVT01023531001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 Archaeplastida
GSVIVT01032452001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
GSVIVT01036712001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
Gb_03994 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_09907 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.02 Archaeplastida
Gb_39484 No alias transcription factor (MYB) 0.12 Archaeplastida
LOC_Os01g19330.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os02g09480.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os03g20090.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os05g35500.1 No alias transcription factor (MYB) 0.06 Archaeplastida
LOC_Os06g02250.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g37970.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os08g43550.1 No alias transcription factor (MYB) 0.04 Archaeplastida
LOC_Os11g35390.1 No alias transcription factor (MYB) 0.04 Archaeplastida
MA_130918g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_139924g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_162812g0020 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_175772g0010 No alias transcription factor (MYB) 0.08 Archaeplastida
MA_223201g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_23348g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_437179g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_446064g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_460508g0010 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_9476g0040 No alias Transcription factor MYB3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Mp4g21790.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c1_4970V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c25_3170V3.1 No alias myb domain protein 16 0.03 Archaeplastida
Pp3c5_2150V3.1 No alias myb domain protein 109 0.04 Archaeplastida
Pp3c6_9970V3.1 No alias myb domain protein 106 0.03 Archaeplastida
Pp3c7_23490V3.1 No alias myb domain protein 106 0.02 Archaeplastida
Pp3c8_16720V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Solyc02g087960.3.1 No alias transcription factor (MYB) 0.07 Archaeplastida
Solyc03g005570.3.1 No alias transcription factor (MYB) 0.03 Archaeplastida
Solyc06g071690.3.1 No alias transcription factor (MYB) 0.05 Archaeplastida
Zm00001e001492_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e001803_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e013910_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e014925_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e015239_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e024037_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e033519_P001 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e035619_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e039235_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
AMTR_s00007p00169630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 LandPlants
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.04 LandPlants
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.06 LandPlants
GSVIVT01000219001 No alias No description available 0.05 LandPlants
Gb_01889 No alias transcription factor (MYB) 0.01 LandPlants
Gb_35820 No alias transcription factor (MYB) 0.02 LandPlants
Gb_39484 No alias transcription factor (MYB) 0.12 LandPlants
LOC_Os02g09480.1 No alias transcription factor (MYB) 0.03 LandPlants
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.02 LandPlants
Mp5g14610.1 No alias transcription factor (MYB) 0.02 LandPlants
Pp3c5_2150V3.1 No alias myb domain protein 109 0.04 LandPlants
Zm00001e013910_P001 No alias transcription factor (MYB) 0.01 LandPlants
AMTR_s00007p00169630 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 SeedPlants
AT4G37260 MYB73, ATMYB73 myb domain protein 73 0.04 SeedPlants
AT5G40360 MYB115, AtMYB115 myb domain protein 115 0.01 SeedPlants
AT5G67300 MYBR1, MYB44,... myb domain protein r1 0.06 SeedPlants
GSVIVT01000219001 No alias No description available 0.05 SeedPlants
Gb_35820 No alias transcription factor (MYB) 0.02 SeedPlants
LOC_Os06g43090.1 No alias transcription factor (MYB) 0.02 SeedPlants
Zm00001e013910_P001 No alias transcription factor (MYB) 0.01 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 14 59
IPR001005 SANT/Myb 68 109
No external refs found!