Solyc04g076370.4.1


Description : Pentatricopeptide repeat-containing protein At2g27800, mitochondrial OS=Arabidopsis thaliana (sp|q9zuy1|pp173_arath : 447.0)


Gene families : OG_01_0004753 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004753_tree ,
OG_02_0003277 (LandPlants) Phylogenetic Tree(s): OG_02_0003277_tree ,
OG_03_0009118 (SeedPlants) Phylogenetic Tree(s): OG_03_0009118_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g076370.4.1
Cluster HCCA: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00205450 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g25210,... 0.03 Archaeplastida
AMTR_s00119p00084460 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27800,... 0.03 Archaeplastida
MA_10433557g0010 No alias Pentatricopeptide repeat-containing protein At2g27800,... 0.07 Archaeplastida
Zm00001e036305_P001 No alias Pentatricopeptide repeat-containing protein At3g25210,... 0.04 Archaeplastida
AMTR_s00002p00205450 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g25210,... 0.03 LandPlants
AMTR_s00119p00084460 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g27800,... 0.03 LandPlants
AT3G25210 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
MA_10433557g0010 No alias Pentatricopeptide repeat-containing protein At2g27800,... 0.07 LandPlants
AT2G27800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 SeedPlants
MA_10433557g0010 No alias Pentatricopeptide repeat-containing protein At2g27800,... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 239 263
IPR002885 Pentatricopeptide_repeat 344 374
IPR002885 Pentatricopeptide_repeat 271 318
No external refs found!