AT1G71720


Description : Nucleic acid-binding proteins superfamily


Gene families : OG_01_0005403 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005403_tree ,
OG_02_0004155 (LandPlants) Phylogenetic Tree(s): OG_02_0004155_tree ,
OG_03_0004968 (SeedPlants) Phylogenetic Tree(s): OG_03_0004968_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G71720
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01013706001 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.05 Archaeplastida
LOC_Os05g45920.1 No alias plastidial mRNA chaperone (RLSB/BSF) 0.02 Archaeplastida
MA_495832g0010 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc04g072036.1.1 No alias plastidial mRNA chaperone (RLSB/BSF) 0.05 Archaeplastida
GSVIVT01013706001 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.05 LandPlants
LOC_Os05g45920.1 No alias plastidial mRNA chaperone (RLSB/BSF) 0.02 LandPlants
MA_495832g0010 No alias no hits & (original description: none) 0.04 LandPlants
Mp1g07870.1 No alias plastidial mRNA chaperone (RLSB/BSF) 0.01 LandPlants
Solyc04g072036.1.1 No alias plastidial mRNA chaperone (RLSB/BSF) 0.03 LandPlants
GSVIVT01013706001 No alias 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea 0.03 SeedPlants
Solyc04g072036.1.1 No alias plastidial mRNA chaperone (RLSB/BSF) 0.02 SeedPlants
Zm00001e032251_P002 No alias plastidial mRNA chaperone (RLSB/BSF) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003029 S1_domain 359 419
No external refs found!