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  5. Solyc04g056620.2.1

Solyc04g056620.2.1


Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG_01_0000353 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000353_tree ,
OG_02_0000237 (LandPlants) Phylogenetic Tree(s): OG_02_0000237_tree ,
OG_03_0086395 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g056620.2.1
Cluster HCCA: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00250330 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
AT2G01420 ATPIN4, PIN4 Auxin efflux carrier family protein 0.02 Archaeplastida
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.02 Archaeplastida
LOC_Os01g51780.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os01g58860.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
LOC_Os05g50140.2 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 Archaeplastida
LOC_Os06g44970.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
LOC_Os11g02950.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
Smo268490 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
Zm00001e037682_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 Archaeplastida
AMTR_s00019p00250330 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.05 LandPlants
AT5G57090 EIR1, WAV6,... Auxin efflux carrier family protein 0.02 LandPlants
LOC_Os01g51780.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 LandPlants
LOC_Os01g58860.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
LOC_Os05g50140.2 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.06 LandPlants
LOC_Os06g44970.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004776 Mem_trans 10 177
IPR004776 Mem_trans 185 340
No external refs found!