AT1G71020


Description : ARM repeat superfamily protein


Gene families : OG_01_0000227 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000227_tree ,
OG_02_0000670 (LandPlants) Phylogenetic Tree(s): OG_02_0000670_tree ,
OG_03_0001036 (SeedPlants) Phylogenetic Tree(s): OG_03_0001036_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G71020
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AT1G10560 PUB18, ATPUB18 plant U-box 18 0.03 Archaeplastida
GSVIVT01007275001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01011767001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01021265001 No alias U-box domain-containing protein 17 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_10627 No alias U-box domain-containing protein 13 OS=Arabidopsis... 0.02 Archaeplastida
Gb_12875 No alias E3 ubiquitin ligase (PUB) 0.05 Archaeplastida
Gb_13754 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
Gb_29276 No alias E3 ubiquitin ligase (PUB) 0.02 Archaeplastida
LOC_Os01g60860.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os02g49950.1 No alias E3 ubiquitin ligase (PUB) 0.08 Archaeplastida
LOC_Os05g39930.1 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.03 Archaeplastida
Pp3c10_4480V3.1 No alias plant U-box 13 0.02 Archaeplastida
Pp3c20_16680V3.1 No alias plant U-box 13 0.02 Archaeplastida
Solyc02g072080.1.1 No alias U-box domain-containing protein 17 OS=Arabidopsis... 0.03 Archaeplastida
Solyc04g007640.3.1 No alias E3 ubiquitin ligase (PUB) 0.08 Archaeplastida
Solyc09g056450.4.1 No alias U-box domain-containing protein 9 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e014566_P002 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e019429_P001 No alias U-box domain-containing protein 16 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e023475_P001 No alias E3 ubiquitin ligase (PUB) 0.04 Archaeplastida
GSVIVT01011767001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
Gb_12875 No alias E3 ubiquitin ligase (PUB) 0.02 LandPlants
Gb_13754 No alias E3 ubiquitin ligase (PUB) 0.03 LandPlants
LOC_Os02g49950.1 No alias E3 ubiquitin ligase (PUB) 0.04 LandPlants
MA_9478009g0010 No alias E3 ubiquitin ligase (PUB) 0.02 LandPlants
Pp3c17_580V3.1 No alias plant U-box 13 0.02 LandPlants
Smo231208 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Solyc04g007640.3.1 No alias E3 ubiquitin ligase (PUB) 0.04 LandPlants
Zm00001e023475_P001 No alias E3 ubiquitin ligase (PUB) 0.04 LandPlants
GSVIVT01011767001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 SeedPlants
Gb_13754 No alias E3 ubiquitin ligase (PUB) 0.02 SeedPlants
MA_9478009g0010 No alias E3 ubiquitin ligase (PUB) 0.02 SeedPlants
Solyc04g007640.3.1 No alias E3 ubiquitin ligase (PUB) 0.04 SeedPlants
Zm00001e023475_P001 No alias E3 ubiquitin ligase (PUB) 0.04 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003613 Ubox_domain 243 314
IPR000225 Armadillo 373 412
IPR000225 Armadillo 456 494
IPR000225 Armadillo 499 537
No external refs found!