AT1G70910 (DEP)


Aliases : DEP

Description : RING/U-box superfamily protein


Gene families : OG_01_0026993 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000046 (LandPlants) Phylogenetic Tree(s): OG_02_0000046_tree ,
OG_03_0024917 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G70910
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
AT1G57730 No alias RING/U-box superfamily protein 0.08 Archaeplastida
AT1G57730 No alias RING/U-box superfamily protein 0.05 LandPlants
GSVIVT01015309001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
Gb_16547 No alias E3 ubiquitin-protein ligase CIP8 OS=Arabidopsis thaliana... 0.02 LandPlants
Gb_19820 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os06g08250.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os10g34590.1 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 LandPlants
MA_77269g0010 No alias E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis... 0.02 LandPlants
MA_79051g0010 No alias E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum... 0.02 LandPlants
Solyc05g018050.1.1 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e016135_P001 No alias no hits & (original description: none) 0.02 LandPlants
Zm00001e023806_P001 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.02 LandPlants
Zm00001e028905_P001 No alias Probable E3 ubiquitin-protein ligase RHC1A... 0.02 LandPlants
AT1G57730 No alias RING/U-box superfamily protein 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0010162 seed dormancy process IMP Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 113 152
No external refs found!