Solyc04g026350.3.1


Description : DNA repair protein (CEN2). centrin component CEN of TREX-2 mRNP trafficking complex


Gene families : OG_01_0000031 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000031_tree ,
OG_02_0002452 (LandPlants) Phylogenetic Tree(s): OG_02_0002452_tree ,
OG_03_0002735 (SeedPlants) Phylogenetic Tree(s): OG_03_0002735_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g026350.3.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AT3G50360 CEN2, CEN1, ATCEN2 centrin2 0.04 Archaeplastida
Cpa|evm.model.tig00020960.64 No alias No description available 0.02 Archaeplastida
Cpa|evm.model.tig00021435.47 No alias Calmodulin OS=Mougeotia scalaris 0.02 Archaeplastida
MA_10431603g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_1784178g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
AT3G50360 CEN2, CEN1, ATCEN2 centrin2 0.04 LandPlants
AT3G50360 CEN2, CEN1, ATCEN2 centrin2 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002048 EF_hand_dom 103 167
IPR002048 EF_hand_dom 31 93
No external refs found!