Solyc04g016000.3.1

Description : transcription factor (HSF)

Gene families : OG_01_0000090 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000090_tree ,
OG_02_0000053 (LandPlants) Phylogenetic Tree(s): OG_02_0000053_tree ,
OG_03_0000104 (SeedPlants) Phylogenetic Tree(s): OG_03_0000104_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc04g016000.3.1
Cluster	HCCA: Cluster_164

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00068180	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AMTR_s00073p00033500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
AMTR_s00132p00118400	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.06	Archaeplastida
AT4G11660	AT-HSFB2B, HSFB2B	winged-helix DNA-binding transcription factor family protein	0.04	Archaeplastida
AT4G18880	HSF A4A, AT-HSFA4A	heat shock transcription factor A4A	0.03	Archaeplastida
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.1	Archaeplastida
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.03	Archaeplastida
AT5G62020	AT-HSFB2A, HSFB2A	heat shock transcription factor B2A	0.03	Archaeplastida
GSVIVT01002066001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.06	Archaeplastida
GSVIVT01018041001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.04	Archaeplastida
GSVIVT01020781001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	Archaeplastida
GSVIVT01033257001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.08	Archaeplastida
LOC_Os03g06630.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
LOC_Os03g25120.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
LOC_Os05g45410.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
LOC_Os08g36700.1	No alias	transcription factor (HSF)	0.02	Archaeplastida
LOC_Os09g28354.1	No alias	transcription factor (HSF)	0.05	Archaeplastida
MA_110587g0010	No alias	transcription factor (HSF)	0.05	Archaeplastida
MA_5374g0010	No alias	transcription factor (HSF)	0.04	Archaeplastida
MA_8992661g0010	No alias	transcription factor (HSF)	0.05	Archaeplastida
MA_9434330g0010	No alias	transcription factor (HSF)	0.03	Archaeplastida
Pp3c18_9360V3.1	No alias	heat shock transcription factor B4	0.04	Archaeplastida
Smo93081	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	Archaeplastida
Solyc02g090820.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc03g026020.3.1	No alias	transcription factor (HSF)	0.07	Archaeplastida
Solyc06g053960.3.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
Solyc07g055710.3.1	No alias	transcription factor (HSF)	0.05	Archaeplastida
Solyc09g082670.3.1	No alias	transcription factor (HSF)	0.03	Archaeplastida
Solyc10g079380.2.1	No alias	transcription factor (HSF)	0.04	Archaeplastida
Zm00001e009944_P001	No alias	transcription factor (HSF)	0.02	Archaeplastida
Zm00001e034345_P001	No alias	transcription factor (HSF)	0.04	Archaeplastida
Zm00001e035680_P002	No alias	transcription factor (HSF)	0.03	Archaeplastida
AMTR_s00040p00209530	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	LandPlants
AMTR_s00132p00118400	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	LandPlants
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.06	LandPlants
AT3G22830	AT-HSFA6B, HSFA6B	heat shock transcription factor A6B	0.02	LandPlants
AT4G18880	HSF A4A, AT-HSFA4A	heat shock transcription factor A4A	0.02	LandPlants
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.07	LandPlants
AT5G43840	HSFA6A, AT-HSFA6A	heat shock transcription factor A6A	0.03	LandPlants
AT5G62020	AT-HSFB2A, HSFB2A	heat shock transcription factor B2A	0.02	LandPlants
GSVIVT01020781001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	LandPlants
GSVIVT01033257001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.07	LandPlants
Gb_00558	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.02	LandPlants
Gb_11758	No alias	transcription factor (HSF). transcriptional regulator (HsfA1)	0.02	LandPlants
LOC_Os03g06630.1	No alias	transcription factor (HSF)	0.03	LandPlants
LOC_Os08g36700.1	No alias	transcription factor (HSF)	0.02	LandPlants
LOC_Os09g28354.1	No alias	transcription factor (HSF)	0.04	LandPlants
MA_110587g0010	No alias	transcription factor (HSF)	0.04	LandPlants
MA_5374g0010	No alias	transcription factor (HSF)	0.02	LandPlants
MA_8812600g0010	No alias	transcription factor (HSF)	0.02	LandPlants
MA_8992661g0010	No alias	transcription factor (HSF)	0.03	LandPlants
MA_9434330g0010	No alias	transcription factor (HSF)	0.03	LandPlants
MpVg00470.1	No alias	No annotation	0.01	LandPlants
Pp3c18_9360V3.1	No alias	heat shock transcription factor B4	0.02	LandPlants
Smo92634	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	LandPlants
Smo93081	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	LandPlants
Solyc03g026020.3.1	No alias	transcription factor (HSF)	0.04	LandPlants
Solyc07g055710.3.1	No alias	transcription factor (HSF)	0.06	LandPlants
Solyc09g082670.3.1	No alias	transcription factor (HSF)	0.03	LandPlants
Solyc10g079380.2.1	No alias	transcription factor (HSF)	0.04	LandPlants
Zm00001e034345_P001	No alias	transcription factor (HSF)	0.03	LandPlants
AMTR_s00073p00033500	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	SeedPlants
AMTR_s00132p00118400	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	SeedPlants
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.04	SeedPlants
AT3G24520	AT-HSFC1, HSFC1	heat shock transcription factor C1	0.01	SeedPlants
AT4G36990	HSF4, HSFB1,...	heat shock factor 4	0.04	SeedPlants
GSVIVT01033257001	No alias	RNA biosynthesis.transcriptional activation.HSF (heat...	0.05	SeedPlants
MA_110587g0010	No alias	transcription factor (HSF)	0.03	SeedPlants
MA_8812600g0010	No alias	transcription factor (HSF)	0.01	SeedPlants
MA_8992661g0010	No alias	transcription factor (HSF)	0.02	SeedPlants
MA_9434330g0010	No alias	transcription factor (HSF)	0.02	SeedPlants
Solyc03g026020.3.1	No alias	transcription factor (HSF)	0.03	SeedPlants
Solyc10g079380.2.1	No alias	transcription factor (HSF)	0.04	SeedPlants
Zm00001e037244_P001	No alias	transcription factor (HSF)	0.01	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	29	118

External Links

No external refs found!

Solyc04g016000.3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation