Solyc04g009420.3.1


Description : PsbP domain-containing protein 2, chloroplastic OS=Arabidopsis thaliana (sp|q8vy52|ppd2_arath : 227.0)


Gene families : OG_01_0006721 (Archaeplastida) Phylogenetic Tree(s): OG_01_0006721_tree ,
OG_02_0008444 (LandPlants) Phylogenetic Tree(s): OG_02_0008444_tree ,
OG_03_0010152 (SeedPlants) Phylogenetic Tree(s): OG_03_0010152_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g009420.3.1
Cluster HCCA: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
AT2G28605 No alias Photosystem II reaction center PsbP family protein 0.07 Archaeplastida
GSVIVT01022331001 No alias PsbP domain-containing protein 2, chloroplastic... 0.09 Archaeplastida
MA_8140147g0010 No alias PsbP domain-containing protein 2, chloroplastic... 0.04 Archaeplastida
Mp5g12900.1 No alias PsbP domain-containing protein 2, chloroplastic... 0.03 Archaeplastida
Pp3c8_18060V3.1 No alias Photosystem II reaction center PsbP family protein 0.07 Archaeplastida
Zm00001e040897_P001 No alias PsbP domain-containing protein 2, chloroplastic... 0.03 Archaeplastida
AT2G28605 No alias Photosystem II reaction center PsbP family protein 0.05 LandPlants
GSVIVT01022331001 No alias PsbP domain-containing protein 2, chloroplastic... 0.09 LandPlants
MA_8140147g0010 No alias PsbP domain-containing protein 2, chloroplastic... 0.03 LandPlants
Mp5g12900.1 No alias PsbP domain-containing protein 2, chloroplastic... 0.03 LandPlants
Pp3c8_18060V3.1 No alias Photosystem II reaction center PsbP family protein 0.06 LandPlants
Zm00001e040897_P001 No alias PsbP domain-containing protein 2, chloroplastic... 0.04 LandPlants
AT2G28605 No alias Photosystem II reaction center PsbP family protein 0.05 SeedPlants
GSVIVT01022331001 No alias PsbP domain-containing protein 2, chloroplastic... 0.09 SeedPlants
MA_8140147g0010 No alias PsbP domain-containing protein 2, chloroplastic... 0.04 SeedPlants
Zm00001e040897_P001 No alias PsbP domain-containing protein 2, chloroplastic... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
CC GO:0009523 photosystem II IEA Interproscan
CC GO:0009654 photosystem II oxygen evolving complex IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0019898 extrinsic component of membrane IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002683 PsbP_C 86 239
No external refs found!