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  5. Solyc04g008570.4.1

Solyc04g008570.4.1


Description : Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana (sp|q66gp4|pp379_arath : 572.0)


Gene families : OG_01_0008241 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008241_tree ,
OG_02_0006918 (LandPlants) Phylogenetic Tree(s): OG_02_0006918_tree ,
OG_03_0004713 (SeedPlants) Phylogenetic Tree(s): OG_03_0004713_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g008570.4.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.1 Archaeplastida
GSVIVT01010259001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.05 Archaeplastida
GSVIVT01032336001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 Archaeplastida
LOC_Os04g49350.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.12 Archaeplastida
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.07 Archaeplastida
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.07 Archaeplastida
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.08 LandPlants
GSVIVT01010259001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 LandPlants
GSVIVT01032336001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
LOC_Os04g49350.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.09 LandPlants
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.05 LandPlants
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.05 LandPlants
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.08 SeedPlants
GSVIVT01010259001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 SeedPlants
GSVIVT01032336001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants
LOC_Os04g49350.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.09 SeedPlants
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 SeedPlants
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 319 341
IPR002885 Pentatricopeptide_repeat 348 373
IPR002885 Pentatricopeptide_repeat 273 301
IPR002885 Pentatricopeptide_repeat 595 620
IPR002885 Pentatricopeptide_repeat 534 566
IPR002885 Pentatricopeptide_repeat 472 532
IPR002885 Pentatricopeptide_repeat 403 460
No external refs found!