Solyc04g008570.4.1


Description : Pentatricopeptide repeat-containing protein At5g13770, chloroplastic OS=Arabidopsis thaliana (sp|q66gp4|pp379_arath : 572.0)


Gene families : OG_01_0008241 (Archaeplastida) Phylogenetic Tree(s): OG_01_0008241_tree ,
OG_02_0006918 (LandPlants) Phylogenetic Tree(s): OG_02_0006918_tree ,
OG_03_0004713 (SeedPlants) Phylogenetic Tree(s): OG_03_0004713_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g008570.4.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.1 Archaeplastida
GSVIVT01010259001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.05 Archaeplastida
GSVIVT01032336001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 Archaeplastida
LOC_Os04g49350.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.12 Archaeplastida
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.07 Archaeplastida
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.07 Archaeplastida
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.08 LandPlants
GSVIVT01010259001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 LandPlants
GSVIVT01032336001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 LandPlants
LOC_Os04g49350.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.09 LandPlants
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.05 LandPlants
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.05 LandPlants
AT5G13770 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.08 SeedPlants
GSVIVT01010259001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 SeedPlants
GSVIVT01032336001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.03 SeedPlants
LOC_Os04g49350.1 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.09 SeedPlants
MA_7931826g0010 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.04 SeedPlants
Zm00001e007144_P001 No alias Pentatricopeptide repeat-containing protein At5g13770,... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 319 341
IPR002885 Pentatricopeptide_repeat 348 373
IPR002885 Pentatricopeptide_repeat 273 301
IPR002885 Pentatricopeptide_repeat 595 620
IPR002885 Pentatricopeptide_repeat 534 566
IPR002885 Pentatricopeptide_repeat 472 532
IPR002885 Pentatricopeptide_repeat 403 460
No external refs found!