Solyc04g008420.1.1


Description : MMD1/DUET meiotic recombination regulating protein. PHD finger transcription factor


Gene families : OG_01_0000911 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000911_tree ,
OG_02_0000834 (LandPlants) Phylogenetic Tree(s): OG_02_0000834_tree ,
OG_03_0001753 (SeedPlants) Phylogenetic Tree(s): OG_03_0001753_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g008420.1.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00035380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.04 Archaeplastida
GSVIVT01011588001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.14 Archaeplastida
GSVIVT01030666001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.06 Archaeplastida
LOC_Os09g27620.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.16 Archaeplastida
Mp3g06700.1 No alias PHD finger transcription factor 0.02 Archaeplastida
Zm00001e034314_P001 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.18 Archaeplastida
AMTR_s00138p00035380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 LandPlants
GSVIVT01011588001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.12 LandPlants
GSVIVT01030666001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.04 LandPlants
LOC_Os09g27620.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.1 LandPlants
Zm00001e034314_P001 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.13 LandPlants
AMTR_s00138p00035380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.PHD finger... 0.02 SeedPlants
GSVIVT01011588001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.13 SeedPlants
GSVIVT01030666001 No alias RNA biosynthesis.transcriptional activation.PHD finger... 0.03 SeedPlants
LOC_Os09g27620.1 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.1 SeedPlants
Zm00001e034314_P001 No alias MMD1/DUET meiotic recombination regulating protein. PHD... 0.12 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019787 Znf_PHD-finger 623 669
No external refs found!