Solyc04g007210.3.1


Description : transcription factor (BBX-CO)


Gene families : OG_01_0000884 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000884_tree ,
OG_02_0000594 (LandPlants) Phylogenetic Tree(s): OG_02_0000594_tree ,
OG_03_0000583 (SeedPlants) Phylogenetic Tree(s): OG_03_0000583_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc04g007210.3.1
Cluster HCCA: Cluster_188

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.03 Archaeplastida
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.05 Archaeplastida
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 Archaeplastida
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.04 Archaeplastida
LOC_Os03g50310.1 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Mp3g19670.1 No alias transcription factor (BBX-CO) 0.02 Archaeplastida
Pp3c22_5440V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 Archaeplastida
Pp3c3_35020V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 Archaeplastida
Smo438000 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 Archaeplastida
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 LandPlants
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 LandPlants
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.03 LandPlants
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.04 LandPlants
GSVIVT01010855001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 LandPlants
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 LandPlants
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.04 LandPlants
LOC_Os03g50310.1 No alias transcription factor (BBX-CO) 0.02 LandPlants
LOC_Os06g15330.1 No alias transcription factor (BBX-CO) 0.02 LandPlants
Mp3g19670.1 No alias transcription factor (BBX-CO) 0.02 LandPlants
Pp3c10_22950V3.1 No alias CCT motif family protein 0.01 LandPlants
Pp3c22_5440V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 LandPlants
Pp3c3_35020V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 LandPlants
Smo438000 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.03 LandPlants
AMTR_s00025p00156240 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 SeedPlants
AMTR_s00049p00156610 evm_27.TU.AmTr_v1... No description available 0.01 SeedPlants
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.04 SeedPlants
AT1G25440 No alias B-box type zinc finger protein with CCT domain 0.02 SeedPlants
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.03 SeedPlants
GSVIVT01011897001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 SeedPlants
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.07 SeedPlants
LOC_Os02g49880.1 No alias transcription factor (BBX-CO) 0.03 SeedPlants
LOC_Os03g50310.1 No alias transcription factor (BBX-CO) 0.01 SeedPlants
Zm00001e015732_P002 No alias transcription factor (BBX-CO) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000315 Znf_B-box 16 59
IPR010402 CCT_domain 373 415
No external refs found!