1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g121590.3.1

Solyc03g121590.3.1


Description : ER tubulae formation factor (RHD3/RL)


Gene families : OG_01_0001124 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001124_tree ,
OG_02_0001177 (LandPlants) Phylogenetic Tree(s): OG_02_0001177_tree ,
OG_03_0001303 (SeedPlants) Phylogenetic Tree(s): OG_03_0001303_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g121590.3.1
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00271330 evm_27.TU.AmTr_v1... Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana 0.02 Archaeplastida
AT3G13870 RHD3 Root hair defective 3 GTP-binding protein (RHD3) 0.06 Archaeplastida
GSVIVT01016855001 No alias Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana 0.11 Archaeplastida
Gb_41499 No alias ER tubulae formation factor (RHD3/RL) 0.04 Archaeplastida
LOC_Os01g39310.1 No alias ER tubulae formation factor (RHD3/RL) 0.07 Archaeplastida
MA_10428123g0010 No alias ER tubulae formation factor (RHD3/RL) 0.02 Archaeplastida
MA_10428984g0010 No alias ER tubulae formation factor (RHD3/RL) 0.02 Archaeplastida
MA_10428984g0020 No alias ER tubulae formation factor (RHD3/RL) 0.02 Archaeplastida
Pp3c21_11720V3.1 No alias Root hair defective 3 GTP-binding protein (RHD3) 0.06 Archaeplastida
Smo73603 No alias Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
Zm00001e020502_P002 No alias ER tubulae formation factor (RHD3/RL) 0.08 Archaeplastida
Zm00001e027781_P001 No alias ER tubulae formation factor (RHD3/RL) 0.11 Archaeplastida
AMTR_s00002p00271330 evm_27.TU.AmTr_v1... Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana 0.02 LandPlants
AT3G13870 RHD3 Root hair defective 3 GTP-binding protein (RHD3) 0.06 LandPlants
GSVIVT01016855001 No alias Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana 0.11 LandPlants
Gb_41499 No alias ER tubulae formation factor (RHD3/RL) 0.03 LandPlants
LOC_Os01g39310.1 No alias ER tubulae formation factor (RHD3/RL) 0.05 LandPlants
MA_10428123g0010 No alias ER tubulae formation factor (RHD3/RL) 0.02 LandPlants
MA_10428984g0010 No alias ER tubulae formation factor (RHD3/RL) 0.02 LandPlants
MA_10428984g0020 No alias ER tubulae formation factor (RHD3/RL) 0.02 LandPlants
Pp3c21_11720V3.1 No alias Root hair defective 3 GTP-binding protein (RHD3) 0.06 LandPlants
Smo73603 No alias Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica 0.02 LandPlants
Zm00001e020502_P002 No alias ER tubulae formation factor (RHD3/RL) 0.08 LandPlants
Zm00001e027781_P001 No alias ER tubulae formation factor (RHD3/RL) 0.11 LandPlants
AT3G13870 RHD3 Root hair defective 3 GTP-binding protein (RHD3) 0.06 SeedPlants
GSVIVT01016855001 No alias Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana 0.1 SeedPlants
Gb_41499 No alias ER tubulae formation factor (RHD3/RL) 0.03 SeedPlants
LOC_Os01g39310.1 No alias ER tubulae formation factor (RHD3/RL) 0.05 SeedPlants
MA_10428984g0010 No alias ER tubulae formation factor (RHD3/RL) 0.01 SeedPlants
Zm00001e020502_P002 No alias ER tubulae formation factor (RHD3/RL) 0.08 SeedPlants
Zm00001e027781_P001 No alias ER tubulae formation factor (RHD3/RL) 0.11 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR008803 RHD3/Sey1 48 765
No external refs found!