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  5. Solyc03g119540.3.1

Solyc03g119540.3.1


Description : transcription factor (BBX-CO)


Gene families : OG_01_0000884 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000884_tree ,
OG_02_0000594 (LandPlants) Phylogenetic Tree(s): OG_02_0000594_tree ,
OG_03_0000583 (SeedPlants) Phylogenetic Tree(s): OG_03_0000583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g119540.3.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.03 Archaeplastida
AT1G49130 No alias B-box type zinc finger protein with CCT domain 0.02 Archaeplastida
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.03 Archaeplastida
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 Archaeplastida
MA_96860g0010 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
Pp3c18_13350V3.1 No alias B-box type zinc finger protein with CCT domain 0.04 Archaeplastida
Pp3c22_5440V3.1 No alias B-box type zinc finger protein with CCT domain 0.03 Archaeplastida
Pp3c7_23900V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 Archaeplastida
Zm00001e030952_P002 No alias transcription factor (BBX-CO) 0.03 Archaeplastida
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 LandPlants
AT1G49130 No alias B-box type zinc finger protein with CCT domain 0.02 LandPlants
AT1G68520 No alias B-box type zinc finger protein with CCT domain 0.03 LandPlants
GSVIVT01024661001 No alias RNA biosynthesis.transcriptional activation.C2C2... 0.04 LandPlants
MA_96860g0010 No alias transcription factor (BBX-CO) 0.03 LandPlants
Pp3c18_13350V3.1 No alias B-box type zinc finger protein with CCT domain 0.04 LandPlants
Pp3c22_5440V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 LandPlants
Pp3c7_23900V3.1 No alias B-box type zinc finger protein with CCT domain 0.02 LandPlants
Zm00001e030952_P002 No alias transcription factor (BBX-CO) 0.03 LandPlants
AMTR_s00073p00061640 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.01 SeedPlants
AT1G73870 No alias B-box type zinc finger protein with CCT domain 0.02 SeedPlants
MA_96860g0010 No alias transcription factor (BBX-CO) 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000315 Znf_B-box 17 60
IPR010402 CCT_domain 349 391
No external refs found!