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  5. Solyc03g118740.3.1

Solyc03g118740.3.1


Description : auxin transporter (PIN). auxin efflux transporter (PIN)


Gene families : OG_01_0000353 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000353_tree ,
OG_02_0000237 (LandPlants) Phylogenetic Tree(s): OG_02_0000237_tree ,
OG_03_0000465 (SeedPlants) Phylogenetic Tree(s): OG_03_0000465_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g118740.3.1
Cluster HCCA: Cluster_70

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00137670 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.03 Archaeplastida
AMTR_s00019p00250330 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
AMTR_s00101p00149240 evm_27.TU.AmTr_v1... Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
AT1G73590 ATPIN1, PIN1 Auxin efflux carrier family protein 0.03 Archaeplastida
GSVIVT01008430001 No alias Solute transport.carrier-mediated transport.BART... 0.04 Archaeplastida
GSVIVT01025749001 No alias Solute transport.carrier-mediated transport.BART... 0.05 Archaeplastida
LOC_Os02g50960.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
LOC_Os12g04000.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
MA_10433084g0010 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.03 Archaeplastida
Smo102666 No alias Solute transport.carrier-mediated transport.BART... 0.02 Archaeplastida
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 Archaeplastida
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 Archaeplastida
GSVIVT01008430001 No alias Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
GSVIVT01025749001 No alias Solute transport.carrier-mediated transport.BART... 0.05 LandPlants
LOC_Os01g45550.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 LandPlants
LOC_Os01g51780.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
LOC_Os02g50960.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 LandPlants
LOC_Os12g04000.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Pp3c23_10200V3.1 No alias Auxin efflux carrier family protein 0.01 LandPlants
Pp3c24_2970V3.1 No alias Auxin efflux carrier family protein 0.01 LandPlants
Smo102666 No alias Solute transport.carrier-mediated transport.BART... 0.02 LandPlants
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 LandPlants
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.04 LandPlants
GSVIVT01008430001 No alias Solute transport.carrier-mediated transport.BART... 0.02 SeedPlants
LOC_Os01g45550.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.01 SeedPlants
LOC_Os02g50960.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 SeedPlants
LOC_Os12g04000.1 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 SeedPlants
Zm00001e024071_P002 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.02 SeedPlants
Zm00001e036089_P001 No alias auxin transporter (PIN). auxin efflux transporter (PIN) 0.03 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR004776 Mem_trans 9 606
No external refs found!