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  5. Solyc03g116900.3.1

Solyc03g116900.3.1


Description : metal cation transporter (NRAMP)


Gene families : OG_01_0000462 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000462_tree ,
OG_02_0000754 (LandPlants) Phylogenetic Tree(s): OG_02_0000754_tree ,
OG_03_0001697 (SeedPlants) Phylogenetic Tree(s): OG_03_0001697_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g116900.3.1
Cluster HCCA: Cluster_175

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00203p00032500 evm_27.TU.AmTr_v1... Metal transporter Nramp3 OS=Oryza sativa subsp. japonica 0.02 Archaeplastida
GSVIVT01000173001 No alias Solute transport.carrier-mediated transport.APC... 0.02 Archaeplastida
Gb_30457 No alias metal cation transporter (NRAMP) 0.03 Archaeplastida
Gb_39414 No alias metal cation transporter (NRAMP) 0.04 Archaeplastida
LOC_Os03g11010.1 No alias metal cation transporter (NRAMP) 0.04 Archaeplastida
MA_10430197g0030 No alias metal cation transporter (NRAMP) 0.04 Archaeplastida
MA_10437046g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_171796g0010 No alias Metal transporter Nramp5 OS=Oryza sativa subsp. japonica... 0.04 Archaeplastida
Mp4g07480.1 No alias metal cation transporter (NRAMP) 0.03 Archaeplastida
Mp4g12740.1 No alias metal cation transporter (NRAMP) 0.02 Archaeplastida
Mp4g20480.1 No alias metal cation transporter (NRAMP) 0.02 Archaeplastida
Pp3c2_37310V3.1 No alias natural resistance associated macrophage protein 4 0.04 Archaeplastida
Zm00001e011161_P002 No alias metal cation transporter (NRAMP) 0.02 Archaeplastida
Zm00001e033238_P004 No alias No annotation 0.03 Archaeplastida
AMTR_s00203p00031460 evm_27.TU.AmTr_v1... Metal transporter Nramp5 OS=Oryza sativa subsp. japonica 0.02 LandPlants
AMTR_s00203p00032500 evm_27.TU.AmTr_v1... Metal transporter Nramp3 OS=Oryza sativa subsp. japonica 0.02 LandPlants
Gb_39414 No alias metal cation transporter (NRAMP) 0.03 LandPlants
Zm00001e033238_P004 No alias No annotation 0.03 LandPlants
Zm00001e033238_P004 No alias No annotation 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0030001 metal ion transport IEA Interproscan
MF GO:0046873 metal ion transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001046 NRAMP_fam 66 426
No external refs found!