Solyc03g116680.3.1

Description : methylation reader (MBD10-11)

Gene families : OG_01_0003057 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003057_tree ,
OG_02_0002066 (LandPlants) Phylogenetic Tree(s): OG_02_0002066_tree ,
OG_03_0002151 (SeedPlants) Phylogenetic Tree(s): OG_03_0002151_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g116680.3.1
Cluster	HCCA: Cluster_196

Target	Alias	Description	ECC score	Gene Family Method
Zm00001e012390_P001	No alias	methylation reader (MBD10-11)	0.04	Archaeplastida
Zm00001e003265_P002	No alias	methylation reader (MBD10-11)	0.03	LandPlants
Zm00001e012390_P001	No alias	methylation reader (MBD10-11)	0.03	LandPlants
Zm00001e003265_P002	No alias	methylation reader (MBD10-11)	0.03	SeedPlants
Zm00001e004995_P005	No alias	methylation reader (MBD10-11)	0.02	SeedPlants
Zm00001e012390_P001	No alias	methylation reader (MBD10-11)	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0018995	host cellular component	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001739	Methyl_CpG_DNA-bd	6	70

External Links

No external refs found!