Solyc03g114950.2.1


Description : subfamily ABCB transporter


Gene families : OG_01_0001563 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001563_tree ,
OG_02_0006377 (LandPlants) Phylogenetic Tree(s): OG_02_0006377_tree ,
OG_03_0007367 (SeedPlants) Phylogenetic Tree(s): OG_03_0007367_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g114950.2.1
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00047p00228170 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 Archaeplastida
Cpa|evm.model.tig00021127.70 No alias ABC transporter B family member 25 OS=Oryza sativa... 0.01 Archaeplastida
Cre02.g083354 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
LOC_Os03g54790.1 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_814691g0010 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp2g03180.1 No alias subfamily ABCB transporter 0.01 Archaeplastida
Zm00001e012019_P002 No alias subfamily ABCB transporter 0.02 Archaeplastida
MA_814691g0010 No alias no hits & (original description: none) 0.06 LandPlants
Mp2g03180.1 No alias subfamily ABCB transporter 0.01 LandPlants
MA_814691g0010 No alias no hits & (original description: none) 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 410 560
IPR011527 ABC1_TM_dom 67 342
No external refs found!