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  5. Solyc03g114140.3.1

Solyc03g114140.3.1


Description : ssRNA polymerase (RDR2)


Gene families : OG_01_0000823 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000823_tree ,
OG_02_0002293 (LandPlants) Phylogenetic Tree(s): OG_02_0002293_tree ,
OG_03_0008689 (SeedPlants) Phylogenetic Tree(s): OG_03_0008689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g114140.3.1
Cluster HCCA: Cluster_202

Target Alias Description ECC score Gene Family Method Actions
AT3G49500 SDE1, RDR6, SGS2 RNA-dependent RNA polymerase 6 0.04 Archaeplastida
Cpa|evm.model.tig00000310.24 No alias No description available 0.02 Archaeplastida
LOC_Os04g39160.1 No alias ssRNA polymerase (RDR2) 0.03 Archaeplastida
Mp1g24060.1 No alias RNA-dependent RNA polymerase 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
GSVIVT01007792001 No alias RNA biosynthesis.siRNA biogenesis.RDR2 ssRNA polymerase 0.02 LandPlants
LOC_Os04g39160.1 No alias ssRNA polymerase (RDR2) 0.02 LandPlants
Zm00001e007872_P002 No alias ssRNA polymerase (RDR2) 0.02 LandPlants
GSVIVT01007792001 No alias RNA biosynthesis.siRNA biogenesis.RDR2 ssRNA polymerase 0.02 SeedPlants
LOC_Os04g39160.1 No alias ssRNA polymerase (RDR2) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007855 RNA-dep_RNA_pol_euk-typ 380 958
No external refs found!