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  5. Solyc03g112950.4.1

Solyc03g112950.4.1


Description : DNA double-strand break response kinase (ATM). protein kinase (PIKK)


Gene families : OG_01_0004590 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004590_tree ,
OG_02_0005273 (LandPlants) Phylogenetic Tree(s): OG_02_0005273_tree ,
OG_03_0005297 (SeedPlants) Phylogenetic Tree(s): OG_03_0005297_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g112950.4.1
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00206720 evm_27.TU.AmTr_v1... Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G48190 ATM, ATATM ataxia-telangiectasia mutated 0.06 Archaeplastida
Gb_40159 No alias DNA double-strand break response kinase (ATM). protein... 0.03 Archaeplastida
LOC_Os01g01689.1 No alias DNA double-strand break response kinase (ATM). protein... 0.03 Archaeplastida
Zm00001e017145_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00058p00206720 evm_27.TU.AmTr_v1... Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.03 LandPlants
AT3G48190 ATM, ATATM ataxia-telangiectasia mutated 0.05 LandPlants
LOC_Os01g01689.1 No alias DNA double-strand break response kinase (ATM). protein... 0.03 LandPlants
Zm00001e017145_P001 No alias no hits & (original description: none) 0.03 LandPlants
AMTR_s00058p00206720 evm_27.TU.AmTr_v1... Serine/threonine-protein kinase ATM OS=Arabidopsis thaliana 0.03 SeedPlants
AT3G48190 ATM, ATATM ataxia-telangiectasia mutated 0.05 SeedPlants
LOC_Os01g01689.1 No alias DNA double-strand break response kinase (ATM). protein... 0.03 SeedPlants
Zm00001e017145_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000403 PI3/4_kinase_cat_dom 1352 1592
IPR003152 FATC_dom 1648 1677
No external refs found!