1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc03g098320.4.1

Solyc03g098320.4.1


Description : transcription factor (MYB-related)


Gene families : OG_01_0000637 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000637_tree ,
OG_02_0000630 (LandPlants) Phylogenetic Tree(s): OG_02_0000630_tree ,
OG_03_0000581 (SeedPlants) Phylogenetic Tree(s): OG_03_0000581_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g098320.4.1
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00072910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.1 Archaeplastida
AT1G01520 No alias Homeodomain-like superfamily protein 0.08 Archaeplastida
AT3G09600 No alias Homeodomain-like superfamily protein 0.15 Archaeplastida
AT4G01280 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT5G17300 RVE1 Homeodomain-like superfamily protein 0.13 Archaeplastida
GSVIVT01027456001 No alias Multi-process regulation.circadian clock.core oscillator... 0.13 Archaeplastida
GSVIVT01035231001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.08 Archaeplastida
Gb_28874 No alias transcription factor (MYB-related). circadian clock core... 0.03 Archaeplastida
LOC_Os02g45670.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.04 Archaeplastida
LOC_Os06g01670.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.06 Archaeplastida
LOC_Os06g51260.1 No alias transcription factor (MYB-related) 0.06 Archaeplastida
Mp2g14310.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.03 Archaeplastida
Pp3c12_17450V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c3_33220V3.1 No alias Homeodomain-like superfamily protein 0.05 Archaeplastida
Smo78045 No alias Multi-process regulation.circadian clock.evening element... 0.05 Archaeplastida
Zm00001e013333_P002 No alias transcription factor (MYB-related) 0.14 Archaeplastida
Zm00001e023232_P002 No alias transcription factor (MYB-related). REVEILLE circadian... 0.05 Archaeplastida
AMTR_s00044p00072910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.1 LandPlants
AT1G01520 No alias Homeodomain-like superfamily protein 0.08 LandPlants
AT3G09600 No alias Homeodomain-like superfamily protein 0.16 LandPlants
AT4G01280 No alias Homeodomain-like superfamily protein 0.03 LandPlants
AT5G17300 RVE1 Homeodomain-like superfamily protein 0.13 LandPlants
GSVIVT01025544001 No alias Multi-process regulation.circadian clock.evening element... 0.04 LandPlants
GSVIVT01035231001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.08 LandPlants
LOC_Os02g45670.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.04 LandPlants
LOC_Os06g01670.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.04 LandPlants
LOC_Os06g51260.1 No alias transcription factor (MYB-related) 0.06 LandPlants
Mp2g14310.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.03 LandPlants
Pp3c12_17450V3.1 No alias Homeodomain-like superfamily protein 0.02 LandPlants
Smo78045 No alias Multi-process regulation.circadian clock.evening element... 0.04 LandPlants
Zm00001e013333_P002 No alias transcription factor (MYB-related) 0.14 LandPlants
Zm00001e023232_P002 No alias transcription factor (MYB-related). REVEILLE circadian... 0.05 LandPlants
Zm00001e041379_P001 No alias transcription factor (MYB-related) 0.02 LandPlants
AMTR_s00044p00072910 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.06 SeedPlants
AT1G01520 No alias Homeodomain-like superfamily protein 0.06 SeedPlants
AT3G09600 No alias Homeodomain-like superfamily protein 0.14 SeedPlants
AT4G01280 No alias Homeodomain-like superfamily protein 0.03 SeedPlants
AT5G17300 RVE1 Homeodomain-like superfamily protein 0.06 SeedPlants
GSVIVT01025544001 No alias Multi-process regulation.circadian clock.evening element... 0.04 SeedPlants
GSVIVT01035231001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 SeedPlants
LOC_Os02g45670.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.04 SeedPlants
LOC_Os06g01670.1 No alias transcription factor (MYB-related). REVEILLE circadian... 0.04 SeedPlants
LOC_Os06g51260.1 No alias transcription factor (MYB-related) 0.06 SeedPlants
Zm00001e013333_P002 No alias transcription factor (MYB-related) 0.11 SeedPlants
Zm00001e023232_P002 No alias transcription factor (MYB-related). REVEILLE circadian... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001005 SANT/Myb 55 98
No external refs found!