Cre08.g373250


Description : 29.5 protein.degradation Encodes 20S proteasome subunit PAB1 (PAB1). proteasome subunit PAB1 (PAB1)


Gene families : OG_01_0003926 (Gene family) Phylogenetic Tree(s): OG0003926_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR network (cutoff 100): Cre08.g373250
Cluster HCCA cluster: Cluster_38

Target Alias Description ECC score Gene Family Method Actions
AT1G16470 PAB1 proteasome subunit PAB1 0.13 Gene family
AT1G79210 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.01 Gene family
Cpa|evm.model.tig00021357.40 No alias 29.5 protein.degradation Encodes 20S proteasome subunit... 0.2 Gene family
GSVIVT01012066001 No alias No description available 0.08 Gene family
LOC_Os02g42320 Os02g0634900 29.5 protein.degradation Encodes 20S proteasome subunit... 0.09 Gene family
LOC_Os03g26970 Os03g0387100 29.5 protein.degradation Encodes 20S proteasome subunit... 0.07 Gene family
Smo177615 PACid_15405566 No description available 0.04 Gene family
Solyc07g055080.3.1 Solyc07g055080.3 No description available 0.07 Gene family

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA InterProScan
CC GO:0005839 proteasome core complex IEA InterProScan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA InterProScan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000426 Proteasome_asu_N 6 28
IPR001353 Proteasome_sua/b 30 213
No external refs found!