Solyc03g044460.1.1


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g044460.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00183410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.04 Archaeplastida
AT1G27740 RSL4 root hair defective 6-like 4 0.04 Archaeplastida
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.05 Archaeplastida
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
LOC_Os01g02110.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os05g04740.2 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g30090.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os07g39940.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os12g32400.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Mp5g18910.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp6g21470.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
Pp3c27_8050V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
Pp3c4_24380V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Smo413232 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.05 Archaeplastida
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Solyc06g069600.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc07g043580.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.06 Archaeplastida
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e027758_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e034339_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 LandPlants
AMTR_s00066p00183410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 LandPlants
AT1G02340 HFR1, FBI1, REP1, RSF1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.03 LandPlants
AT1G27740 RSL4 root hair defective 6-like 4 0.04 LandPlants
AT2G14760 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 LandPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT4G33880 RSL2 ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 LandPlants
AT5G61270 PIF7 phytochrome-interacting factor7 0.03 LandPlants
GSVIVT01018164001 No alias Transcription factor UNE10 OS=Arabidopsis thaliana 0.04 LandPlants
GSVIVT01018165001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
LOC_Os01g38610.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.04 LandPlants
LOC_Os05g46370.1 No alias transcription factor (bHLH) 0.04 LandPlants
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os08g01700.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os08g36740.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.03 LandPlants
LOC_Os12g32400.1 No alias transcription factor (bHLH) 0.04 LandPlants
MA_306658g0010 No alias transcription factor (bHLH) 0.02 LandPlants
Mp5g18910.1 No alias transcription factor (bHLH) 0.03 LandPlants
Mp6g21470.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc01g107140.3.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc02g091440.2.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc04g077960.1.1 No alias transcription factor (bHLH) 0.04 LandPlants
Solyc07g043580.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.06 LandPlants
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Solyc12g088380.1.1 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.06 LandPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e020477_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e025656_P001 No alias transcription factor (bHLH) 0.02 LandPlants
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e034339_P001 No alias transcription factor (bHLH) 0.06 LandPlants
Zm00001e038765_P001 No alias transcription factor (bHLH) 0.02 LandPlants
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 SeedPlants
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 SeedPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 SeedPlants
AT5G61270 PIF7 phytochrome-interacting factor7 0.03 SeedPlants
GSVIVT01028238001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 SeedPlants
LOC_Os01g38610.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os03g10770.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os08g36740.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os12g32400.1 No alias transcription factor (bHLH) 0.04 SeedPlants
MA_10156436g0010 No alias transcription factor (bHLH) 0.02 SeedPlants
Solyc07g043580.4.1 No alias transcription factor (bHLH). PIF red/far-red light... 0.04 SeedPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 SeedPlants
Zm00001e020477_P001 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e027758_P002 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e034339_P001 No alias transcription factor (bHLH) 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR011598 bHLH_dom 70 111
No external refs found!