Solyc03g031750.2.1


Description : component VPS28 of ESCRT-I complex


Gene families : OG_01_0004378 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004378_tree ,
OG_02_0004887 (LandPlants) Phylogenetic Tree(s): OG_02_0004887_tree ,
OG_03_0005884 (SeedPlants) Phylogenetic Tree(s): OG_03_0005884_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc03g031750.2.1
Cluster HCCA: Cluster_247

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00088p00095460 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 Archaeplastida
AT4G21560 VPS28-1 vacuolar protein sorting-associated protein 28 homolog 1 0.03 Archaeplastida
Cpa|evm.model.tig00020850.3 No alias Vesicle trafficking.endomembrane trafficking.ESCRT... 0.01 Archaeplastida
Gb_37209 No alias component VPS28 of ESCRT-I complex 0.06 Archaeplastida
Zm00001e019625_P001 No alias component VPS28 of ESCRT-I complex 0.04 Archaeplastida
Zm00001e028948_P001 No alias component VPS28 of ESCRT-I complex 0.02 Archaeplastida
AMTR_s00088p00095460 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 LandPlants
AT4G21560 VPS28-1 vacuolar protein sorting-associated protein 28 homolog 1 0.02 LandPlants
Gb_37209 No alias component VPS28 of ESCRT-I complex 0.06 LandPlants
Zm00001e019625_P001 No alias component VPS28 of ESCRT-I complex 0.03 LandPlants
Zm00001e028948_P001 No alias component VPS28 of ESCRT-I complex 0.02 LandPlants
AMTR_s00088p00095460 evm_27.TU.AmTr_v1... Vesicle trafficking.endomembrane trafficking.ESCRT... 0.04 SeedPlants
AT4G21560 VPS28-1 vacuolar protein sorting-associated protein 28 homolog 1 0.02 SeedPlants
Gb_37209 No alias component VPS28 of ESCRT-I complex 0.06 SeedPlants
Zm00001e019625_P001 No alias component VPS28 of ESCRT-I complex 0.03 SeedPlants
Zm00001e028948_P001 No alias component VPS28 of ESCRT-I complex 0.02 SeedPlants

Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEA Interproscan
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007143 Vps28 18 204
No external refs found!