Solyc03g031750.2.1

Description : component VPS28 of ESCRT-I complex

Gene families : OG_01_0004378 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004378_tree ,
OG_02_0004887 (LandPlants) Phylogenetic Tree(s): OG_02_0004887_tree ,
OG_03_0005884 (SeedPlants) Phylogenetic Tree(s): OG_03_0005884_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc03g031750.2.1
Cluster	HCCA: Cluster_247

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00088p00095460	evm_27.TU.AmTr_v1...	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.04	Archaeplastida
AT4G21560	VPS28-1	vacuolar protein sorting-associated protein 28 homolog 1	0.03	Archaeplastida
Cpa\|evm.model.tig00020850.3	No alias	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.01	Archaeplastida
Gb_37209	No alias	component VPS28 of ESCRT-I complex	0.06	Archaeplastida
Zm00001e019625_P001	No alias	component VPS28 of ESCRT-I complex	0.04	Archaeplastida
Zm00001e028948_P001	No alias	component VPS28 of ESCRT-I complex	0.02	Archaeplastida
AMTR_s00088p00095460	evm_27.TU.AmTr_v1...	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.04	LandPlants
AT4G21560	VPS28-1	vacuolar protein sorting-associated protein 28 homolog 1	0.02	LandPlants
Gb_37209	No alias	component VPS28 of ESCRT-I complex	0.06	LandPlants
Zm00001e019625_P001	No alias	component VPS28 of ESCRT-I complex	0.03	LandPlants
Zm00001e028948_P001	No alias	component VPS28 of ESCRT-I complex	0.02	LandPlants
AMTR_s00088p00095460	evm_27.TU.AmTr_v1...	Vesicle trafficking.endomembrane trafficking.ESCRT...	0.04	SeedPlants
AT4G21560	VPS28-1	vacuolar protein sorting-associated protein 28 homolog 1	0.02	SeedPlants
Gb_37209	No alias	component VPS28 of ESCRT-I complex	0.06	SeedPlants
Zm00001e019625_P001	No alias	component VPS28 of ESCRT-I complex	0.03	SeedPlants
Zm00001e028948_P001	No alias	component VPS28 of ESCRT-I complex	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
CC	GO:0000813	ESCRT I complex	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016192	vesicle-mediated transport	None	Extended
BP	GO:0016197	endosomal transport	None	Extended
BP	GO:0032509	endosome transport via multivesicular body sorting pathway	IEA	Interproscan
CC	GO:0032991	protein-containing complex	None	Extended
CC	GO:0036452	ESCRT complex	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0071985	multivesicular body sorting pathway	None	Extended
CC	GO:0098796	membrane protein complex	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR007143	Vps28	18	204

External Links

No external refs found!