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  5. Solyc02g093280.2.1

Solyc02g093280.2.1


Description : transcription factor (bHLH)


Gene families : OG_01_0000092 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000092_tree ,
OG_02_0000040 (LandPlants) Phylogenetic Tree(s): OG_02_0000040_tree ,
OG_03_0000031 (SeedPlants) Phylogenetic Tree(s): OG_03_0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g093280.2.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00146370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.04 Archaeplastida
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.04 Archaeplastida
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.06 Archaeplastida
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 Archaeplastida
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G36930 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT5G01305 No alias No description available 0.08 Archaeplastida
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.05 Archaeplastida
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Gb_27302 No alias transcription factor (bHLH) 0.05 Archaeplastida
Gb_27869 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.08 Archaeplastida
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_26114g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
MA_306658g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Pp3c16_21590V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Archaeplastida
Pp3c17_15380V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c1_40040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c25_13740V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c3_8460V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 Archaeplastida
Pp3c4_4040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Smo403406 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e006917_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.09 Archaeplastida
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e032280_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e041668_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
AMTR_s00021p00146370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 LandPlants
AMTR_s00066p00183410 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.04 LandPlants
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.04 LandPlants
AT2G43010 SRL2, PIF4, AtPIF4 phytochrome interacting factor 4 0.02 LandPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 LandPlants
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 LandPlants
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
AT5G01305 No alias No description available 0.07 LandPlants
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.05 LandPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 LandPlants
GSVIVT01009467001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
GSVIVT01030846001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 LandPlants
GSVIVT01031338001 No alias External stimuli response.light.red/far red light.PIF... 0.02 LandPlants
Gb_27302 No alias transcription factor (bHLH) 0.05 LandPlants
Gb_27869 No alias transcription factor (bHLH) 0.04 LandPlants
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.08 LandPlants
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.05 LandPlants
LOC_Os06g47980.1 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os08g36740.1 No alias transcription factor (bHLH) 0.02 LandPlants
LOC_Os09g28210.1 No alias transcription factor (bHLH) 0.02 LandPlants
MA_26114g0010 No alias transcription factor (bHLH) 0.02 LandPlants
MA_306658g0010 No alias transcription factor (bHLH) 0.03 LandPlants
Pp3c3_8460V3.1 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.03 LandPlants
Pp3c4_4040V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 LandPlants
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.07 LandPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.09 LandPlants
Zm00001e020012_P001 No alias transcription factor (bHLH) 0.03 LandPlants
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.05 LandPlants
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.03 LandPlants
AMTR_s00024p00250370 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 SeedPlants
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.02 SeedPlants
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.02 SeedPlants
AT1G68240 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 SeedPlants
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 SeedPlants
AT4G36930 SPT basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 SeedPlants
AT5G01305 No alias No description available 0.04 SeedPlants
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.03 SeedPlants
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 SeedPlants
GSVIVT01009467001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 SeedPlants
GSVIVT01030846001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 SeedPlants
Gb_27302 No alias transcription factor (bHLH) 0.03 SeedPlants
LOC_Os01g61480.1 No alias transcription factor (bHLH) 0.07 SeedPlants
LOC_Os02g48060.1 No alias transcription factor (bHLH) 0.02 SeedPlants
LOC_Os06g06900.1 No alias transcription factor (bHLH) 0.03 SeedPlants
Solyc09g005070.1.1 No alias transcription factor (bHLH) 0.05 SeedPlants
Zm00001e015610_P001 No alias transcription factor (bHLH) 0.02 SeedPlants
Zm00001e019392_P001 No alias transcription factor (bHLH) 0.06 SeedPlants
Zm00001e021883_P001 No alias transcription factor (bHLH) 0.05 SeedPlants
Zm00001e029147_P001 No alias transcription factor (bHLH) 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 146 192
No external refs found!