1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc02g090910.3.1

Solyc02g090910.3.1


Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 118.0)


Gene families : OG_01_0005140 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005140_tree ,
OG_02_0004209 (LandPlants) Phylogenetic Tree(s): OG_02_0004209_tree ,
OG_03_0006102 (SeedPlants) Phylogenetic Tree(s): OG_03_0006102_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g090910.3.1
Cluster HCCA: Cluster_150

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01022126001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_27963 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e018673_P002 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.07 Archaeplastida
Zm00001e028338_P001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.05 Archaeplastida
AMTR_s00099p00085080 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 LandPlants
Gb_27963 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 LandPlants
LOC_Os01g71770.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 LandPlants
Pp3c3_17370V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 LandPlants
Zm00001e018673_P002 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.07 LandPlants
Zm00001e028338_P001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.05 LandPlants
AMTR_s00099p00085080 evm_27.TU.AmTr_v1... Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.02 SeedPlants
Gb_27963 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 SeedPlants
LOC_Os01g71770.1 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 SeedPlants
Zm00001e018673_P002 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.06 SeedPlants
Zm00001e028338_P001 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.05 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 94 161
IPR000504 RRM_dom 6 64
IPR000504 RRM_dom 239 293
No external refs found!