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  5. Solyc02g087310.3.1

Solyc02g087310.3.1


Description : DEL cell cycle interphase transcription factor. transcription factor (E2F/DP)


Gene families : OG_01_0003319 (Archaeplastida) Phylogenetic Tree(s): OG_01_0003319_tree ,
OG_02_0003235 (LandPlants) Phylogenetic Tree(s): OG_02_0003235_tree ,
OG_03_0003409 (SeedPlants) Phylogenetic Tree(s): OG_03_0003409_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g087310.3.1
Cluster HCCA: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
AT3G01330 E2FF, DEL3, E2L2 DP-E2F-like protein 3 0.07 Archaeplastida
AT3G48160 DEL1, E2FE, E2L3 DP-E2F-like 1 0.08 Archaeplastida
GSVIVT01007832001 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
Gb_38482 No alias DEL cell cycle interphase transcription factor.... 0.04 Archaeplastida
LOC_Os02g50630.1 No alias DEL cell cycle interphase transcription factor.... 0.11 Archaeplastida
LOC_Os06g13670.1 No alias DEL cell cycle interphase transcription factor.... 0.07 Archaeplastida
Mp3g20990.1 No alias DEL cell cycle interphase transcription factor.... 0.1 Archaeplastida
Pp3c19_18240V3.1 No alias DP-E2F-like 1 0.04 Archaeplastida
Pp3c21_13480V3.1 No alias DP-E2F-like 1 0.07 Archaeplastida
Smo421405 No alias RNA biosynthesis.transcriptional activation.E2F/DP... 0.04 Archaeplastida
Zm00001e015774_P001 No alias DEL cell cycle interphase transcription factor.... 0.03 Archaeplastida
AT3G01330 E2FF, DEL3, E2L2 DP-E2F-like protein 3 0.05 LandPlants
AT3G48160 DEL1, E2FE, E2L3 DP-E2F-like 1 0.08 LandPlants
GSVIVT01007832001 No alias RNA processing.organelle machineries.RNA... 0.03 LandPlants
Gb_38482 No alias DEL cell cycle interphase transcription factor.... 0.04 LandPlants
LOC_Os02g50630.1 No alias DEL cell cycle interphase transcription factor.... 0.09 LandPlants
LOC_Os06g13670.1 No alias DEL cell cycle interphase transcription factor.... 0.07 LandPlants
Mp3g20990.1 No alias DEL cell cycle interphase transcription factor.... 0.1 LandPlants
Pp3c19_18240V3.1 No alias DP-E2F-like 1 0.04 LandPlants
Pp3c21_13480V3.1 No alias DP-E2F-like 1 0.06 LandPlants
Smo421405 No alias RNA biosynthesis.transcriptional activation.E2F/DP... 0.04 LandPlants
Zm00001e015774_P001 No alias DEL cell cycle interphase transcription factor.... 0.02 LandPlants
AT3G01330 E2FF, DEL3, E2L2 DP-E2F-like protein 3 0.05 SeedPlants
AT3G48160 DEL1, E2FE, E2L3 DP-E2F-like 1 0.08 SeedPlants
GSVIVT01007832001 No alias RNA processing.organelle machineries.RNA... 0.03 SeedPlants
Gb_38482 No alias DEL cell cycle interphase transcription factor.... 0.02 SeedPlants
LOC_Os02g50630.1 No alias DEL cell cycle interphase transcription factor.... 0.09 SeedPlants
LOC_Os06g13670.1 No alias DEL cell cycle interphase transcription factor.... 0.07 SeedPlants
Zm00001e015774_P001 No alias DEL cell cycle interphase transcription factor.... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
CC GO:0005667 transcription regulator complex IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003316 E2F_WHTH_DNA-bd_dom 21 86
IPR003316 E2F_WHTH_DNA-bd_dom 144 222
No external refs found!