Solyc02g085650.4.1


Description : Pentatricopeptide repeat-containing protein At4g36680, mitochondrial OS=Arabidopsis thaliana (sp|q9m065|pp352_arath : 466.0) & Enzyme classification.EC_3 hydrolases.EC_3.4 hydrolase acting on peptide bond (peptidase)(50.3.4 : 244.2)


Gene families : OG_01_0004280 (Archaeplastida) Phylogenetic Tree(s): OG_01_0004280_tree ,
OG_02_0002954 (LandPlants) Phylogenetic Tree(s): OG_02_0002954_tree ,
OG_03_0000415 (SeedPlants) Phylogenetic Tree(s): OG_03_0000415_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g085650.4.1
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00029p00105510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g36680,... 0.03 Archaeplastida
AT2G18520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Archaeplastida
AT4G36680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 Archaeplastida
LOC_Os02g42210.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.03 Archaeplastida
Zm00001e015190_P001 No alias Pentatricopeptide repeat-containing protein At2g18520,... 0.03 Archaeplastida
Zm00001e019591_P001 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.04 Archaeplastida
AMTR_s00029p00105510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g36680,... 0.03 LandPlants
AT2G18520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 LandPlants
AT4G36680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 LandPlants
LOC_Os02g42210.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.03 LandPlants
Zm00001e015190_P001 No alias Pentatricopeptide repeat-containing protein At2g18520,... 0.03 LandPlants
Zm00001e019591_P001 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.04 LandPlants
AMTR_s00029p00105510 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g36680,... 0.03 SeedPlants
AMTR_s00032p00197250 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g55890,... 0.04 SeedPlants
AT2G18520 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 SeedPlants
AT3G13160 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 SeedPlants
AT4G36680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 SeedPlants
LOC_Os01g57630.2 No alias Pentatricopeptide repeat-containing protein At1g55890,... 0.03 SeedPlants
LOC_Os02g42210.1 No alias Pentatricopeptide repeat-containing protein At4g36680,... 0.03 SeedPlants
Zm00001e015190_P001 No alias Pentatricopeptide repeat-containing protein At2g18520,... 0.03 SeedPlants
Zm00001e019591_P001 No alias PPR-type mitochondrial ribosome regulatory protein (PPR336) 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR032416 Peptidase_M24_C 585 644
IPR002885 Pentatricopeptide_repeat 208 248
IPR002885 Pentatricopeptide_repeat 275 323
IPR002885 Pentatricopeptide_repeat 106 132
IPR002885 Pentatricopeptide_repeat 138 163
IPR002885 Pentatricopeptide_repeat 174 203
IPR000994 Pept_M24 508 573
IPR000994 Pept_M24 425 490
No external refs found!