Solyc02g083660.1.1


Description : no hits & (original description: none)


Gene families : OG_01_0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_02_0000175 (LandPlants) Phylogenetic Tree(s): OG_02_0000175_tree ,
OG_03_0000116 (SeedPlants) Phylogenetic Tree(s): OG_03_0000116_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g083660.1.1
Cluster HCCA: Cluster_95

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00263220 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00008p00185200 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00018p00191870 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00019p00149380 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00030p00032810 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00044p00211560 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00061p00174460 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.06 Archaeplastida
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G49230 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT1G72200 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G01150 RHA2B RING-H2 finger protein 2B 0.03 Archaeplastida
AT2G34000 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G35910 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT2G37580 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT3G03550 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G10910 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT3G62690 ATL5 AtL5 0.03 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT4G17905 ATL4H RING/U-box superfamily protein 0.05 Archaeplastida
AT4G35840 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G05280 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G41440 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT5G43420 No alias RING/U-box superfamily protein 0.03 Archaeplastida
GSVIVT01000015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01009098001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01012019001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
GSVIVT01027769001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01028038001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01028306001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
GSVIVT01032684001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 Archaeplastida
Gb_03946 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_05386 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_14778 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_15297 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.03 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_33184 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_36232 No alias IDF1 iron uptake IRT1-ubiquitin ligase 0.03 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11520.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os01g20930.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os01g55110.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g58540.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g05560.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os03g05570.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g49700.1 No alias E3 ubiquitin-protein ligase ATL4 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os05g29676.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g36310.1 No alias RING-H2 finger protein ATL77 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os06g08820.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g12680.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.06 Archaeplastida
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os06g34620.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g34880.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os06g50370.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g48680.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g37050.1 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os10g39450.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os10g42390.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os11g02424.1 No alias RING-H2 finger protein ATL74 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os11g39640.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os12g02210.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10021g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_10145129g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10426834g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_125507g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_133839g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_211g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_222729g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_31462g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_391590g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_391931g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_634100g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_7120568g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
MA_8710804g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_96368g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Mp6g19130.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c14_22300V3.1 No alias No annotation 0.02 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c22_17730V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.05 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c6_19030V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Smo448587 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Smo74486 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc03g005490.4.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc03g114190.1.1 No alias RING-H2 finger protein ATL56 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc04g009780.1.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.07 Archaeplastida
Solyc08g076830.1.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Solyc10g008080.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc11g005300.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002233_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e003126_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e007103_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e011901_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e014302_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e014709_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e014832_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015495_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e015796_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e022175_P001 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e030102_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e034025_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e037108_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
AMTR_s00001p00263220 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AMTR_s00061p00174460 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
AT3G43430 No alias RING/U-box superfamily protein 0.03 LandPlants
AT4G00305 No alias RING/U-box superfamily protein 0.02 LandPlants
AT5G41400 No alias RING/U-box superfamily protein 0.03 LandPlants
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
GSVIVT01012018001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 LandPlants
GSVIVT01012019001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 LandPlants
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 LandPlants
Gb_28980 No alias no hits & (original description: none) 0.03 LandPlants
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.05 LandPlants
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.04 LandPlants
LOC_Os04g49160.1 No alias no hits & (original description: none) 0.02 LandPlants
LOC_Os07g48680.1 No alias no hits & (original description: none) 0.04 LandPlants
MA_201391g0010 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 LandPlants
Zm00001e015449_P001 No alias no hits & (original description: none) 0.04 LandPlants
Zm00001e041409_P001 No alias no hits & (original description: none) 0.03 LandPlants
AMTR_s00061p00174460 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
AT4G00305 No alias RING/U-box superfamily protein 0.02 SeedPlants
GSVIVT01012015001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
GSVIVT01012019001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
GSVIVT01012022001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 SeedPlants
Gb_28973 No alias Probable E3 ubiquitin-protein ligase RHA1A... 0.02 SeedPlants
Gb_28980 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os01g16120.1 No alias no hits & (original description: none) 0.02 SeedPlants
LOC_Os02g45780.1 No alias no hits & (original description: none) 0.01 SeedPlants
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 SeedPlants
LOC_Os07g48680.1 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001841 Znf_RING 102 145
No external refs found!