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  5. Solyc02g083540.3.1

Solyc02g083540.3.1


Description : mechanosensitive cation channel (MCA)


Gene families : OG_01_0002116 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002116_tree ,
OG_02_0001916 (LandPlants) Phylogenetic Tree(s): OG_02_0001916_tree ,
OG_03_0002070 (SeedPlants) Phylogenetic Tree(s): OG_03_0002070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g083540.3.1
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00152p00084120 evm_27.TU.AmTr_v1... Solute transport.channels.MCA mechanosensitive cation channel 0.04 Archaeplastida
Gb_16864 No alias mechanosensitive cation channel (MCA) 0.05 Archaeplastida
LOC_Os03g06120.3 No alias mechanosensitive cation channel (MCA) 0.05 Archaeplastida
Mp5g19510.1 No alias mechanosensitive cation channel (MCA) 0.02 Archaeplastida
Pp3c12_21520V3.1 No alias PLAC8 family protein 0.07 Archaeplastida
Zm00001e000437_P001 No alias mechanosensitive cation channel (MCA) 0.05 Archaeplastida
AMTR_s00152p00084120 evm_27.TU.AmTr_v1... Solute transport.channels.MCA mechanosensitive cation channel 0.04 LandPlants
Gb_16864 No alias mechanosensitive cation channel (MCA) 0.03 LandPlants
LOC_Os03g06120.3 No alias mechanosensitive cation channel (MCA) 0.04 LandPlants
Mp5g19510.1 No alias mechanosensitive cation channel (MCA) 0.01 LandPlants
Pp3c12_21520V3.1 No alias PLAC8 family protein 0.02 LandPlants
Zm00001e000437_P001 No alias mechanosensitive cation channel (MCA) 0.05 LandPlants
AMTR_s00152p00084120 evm_27.TU.AmTr_v1... Solute transport.channels.MCA mechanosensitive cation channel 0.02 SeedPlants
Gb_16864 No alias mechanosensitive cation channel (MCA) 0.02 SeedPlants
LOC_Os03g06120.3 No alias mechanosensitive cation channel (MCA) 0.03 SeedPlants
Zm00001e000437_P001 No alias mechanosensitive cation channel (MCA) 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 297 394
No external refs found!