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  5. Solyc02g080420.4.1

Solyc02g080420.4.1


Description : mRNA-binding regulatory factor (RBP45/47)


Gene families : OG_01_0000444 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000444_tree ,
OG_02_0000471 (LandPlants) Phylogenetic Tree(s): OG_02_0000471_tree ,
OG_03_0000318 (SeedPlants) Phylogenetic Tree(s): OG_03_0000318_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g080420.4.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT1G47490 ATRBP47C, RBP47C RNA-binding protein 47C 0.02 Archaeplastida
AT3G19130 ATRBP47B, RBP47B RNA-binding protein 47B 0.04 Archaeplastida
AT5G54900 ATRBP45A, RBP45A RNA-binding protein 45A 0.03 Archaeplastida
Gb_20979 No alias Polyadenylate-binding protein RBP47 OS=Nicotiana... 0.03 Archaeplastida
MA_10430323g0010 No alias mRNA-binding regulatory factor (RBP45/47) 0.03 Archaeplastida
MA_10433660g0010 No alias mRNA-binding regulatory factor (RBP45/47) 0.02 Archaeplastida
Mp8g07840.1 No alias mRNA-binding regulatory factor (RBP45/47) 0.04 Archaeplastida
Zm00001e006878_P004 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e022780_P001 No alias mRNA-binding regulatory factor (RBP45/47) 0.04 Archaeplastida
AT1G47490 ATRBP47C, RBP47C RNA-binding protein 47C 0.02 LandPlants
AT3G19130 ATRBP47B, RBP47B RNA-binding protein 47B 0.04 LandPlants
AT5G54900 ATRBP45A, RBP45A RNA-binding protein 45A 0.03 LandPlants
MA_10430323g0010 No alias mRNA-binding regulatory factor (RBP45/47) 0.03 LandPlants
Mp8g07840.1 No alias mRNA-binding regulatory factor (RBP45/47) 0.03 LandPlants
Zm00001e022780_P001 No alias mRNA-binding regulatory factor (RBP45/47) 0.04 LandPlants
AT1G47490 ATRBP47C, RBP47C RNA-binding protein 47C 0.02 SeedPlants
AT3G19130 ATRBP47B, RBP47B RNA-binding protein 47B 0.04 SeedPlants
AT5G54900 ATRBP45A, RBP45A RNA-binding protein 45A 0.03 SeedPlants
LOC_Os04g37690.1 No alias mRNA-binding regulatory factor (RBP45/47) 0.02 SeedPlants
MA_10430323g0010 No alias mRNA-binding regulatory factor (RBP45/47) 0.03 SeedPlants
Zm00001e022780_P001 No alias mRNA-binding regulatory factor (RBP45/47) 0.04 SeedPlants
Zm00001e035105_P001 No alias mRNA-binding regulatory factor (RBP45/47) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 81 146
IPR000504 RRM_dom 174 243
IPR000504 RRM_dom 280 344
No external refs found!