Solyc02g078020.3.1


Description : Protein SMG7L OS=Arabidopsis thaliana (sp|q9fz99|smg7l_arath : 524.0)


Gene families : OG_01_0002555 (Archaeplastida) Phylogenetic Tree(s): OG_01_0002555_tree ,
OG_02_0002119 (LandPlants) Phylogenetic Tree(s): OG_02_0002119_tree ,
OG_03_0012838 (SeedPlants) Phylogenetic Tree(s): OG_03_0012838_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g078020.3.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT1G28260 No alias Telomerase activating protein Est1 0.03 Archaeplastida
GSVIVT01007284001 No alias Protein SMG7L OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01033622001 No alias RNA processing.RNA decay.Nonsense-Mediated mRNA Decay... 0.03 Archaeplastida
Gb_32124 No alias Protein SMG7 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g21350.1 No alias SMG7 Nonsense-Mediated mRNA Decay protein 0.04 Archaeplastida
MA_32980g0010 No alias Protein SMG7 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e009613_P002 No alias SMG7 Nonsense-Mediated mRNA Decay protein 0.02 Archaeplastida
AT1G28260 No alias Telomerase activating protein Est1 0.03 LandPlants
AT5G19400 SMG7 Telomerase activating protein Est1 0.02 LandPlants
GSVIVT01007284001 No alias Protein SMG7L OS=Arabidopsis thaliana 0.04 LandPlants
LOC_Os08g21350.1 No alias SMG7 Nonsense-Mediated mRNA Decay protein 0.03 LandPlants
MA_32980g0010 No alias Protein SMG7 OS=Arabidopsis thaliana... 0.02 LandPlants
AT1G28260 No alias Telomerase activating protein Est1 0.02 SeedPlants
GSVIVT01007284001 No alias Protein SMG7L OS=Arabidopsis thaliana 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR019458 EST1 70 187
IPR018834 DNA/RNA-bd_Est1-type 199 514
No external refs found!