AT1G64880

Description : Ribosomal protein S5 family protein

Gene families : OG_01_0005914 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005914_tree ,
OG_02_0008275 (LandPlants) Phylogenetic Tree(s): OG_02_0008275_tree ,
OG_03_0008374 (SeedPlants) Phylogenetic Tree(s): OG_03_0008374_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G64880
Cluster	HCCA: Cluster_152

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00039p00202100	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.05	Archaeplastida
Cre09.g407100	No alias	No description available	0.03	Archaeplastida
GSVIVT01020716001	No alias	Protein biosynthesis.organelle translation...	0.04	Archaeplastida
Gb_41243	No alias	component mtRPS5 of small ribosomal subunit proteome	0.05	Archaeplastida
LOC_Os02g01230.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.11	Archaeplastida
MA_10285340g0010	No alias	No annotation	0.04	Archaeplastida
MA_955371g0010	No alias	component mtRPS5 of small ribosomal subunit proteome	0.07	Archaeplastida
Mp4g01640.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.04	Archaeplastida
Solyc11g008710.2.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.16	Archaeplastida
Zm00001e013392_P001	No alias	no hits & (original description: none)	0.09	Archaeplastida
AMTR_s00039p00202100	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.05	LandPlants
GSVIVT01020716001	No alias	Protein biosynthesis.organelle translation...	0.02	LandPlants
Gb_41243	No alias	component mtRPS5 of small ribosomal subunit proteome	0.05	LandPlants
LOC_Os02g01230.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.1	LandPlants
MA_10285340g0010	No alias	No annotation	0.04	LandPlants
Mp4g01640.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.04	LandPlants
Solyc11g008710.2.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.16	LandPlants
Zm00001e013392_P001	No alias	no hits & (original description: none)	0.08	LandPlants
AMTR_s00039p00202100	evm_27.TU.AmTr_v1...	Protein biosynthesis.organelle translation...	0.05	SeedPlants
GSVIVT01020716001	No alias	Protein biosynthesis.organelle translation...	0.02	SeedPlants
Gb_41243	No alias	component mtRPS5 of small ribosomal subunit proteome	0.05	SeedPlants
LOC_Os02g01230.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.1	SeedPlants
MA_10285340g0010	No alias	No annotation	0.04	SeedPlants
Solyc11g008710.2.1	No alias	component mtRPS5 of small ribosomal subunit proteome	0.15	SeedPlants
Zm00001e013392_P001	No alias	no hits & (original description: none)	0.08	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	ISS	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	ISS	Interproscan
CC	GO:0005739	mitochondrion	ISM	Interproscan
CC	GO:0005768	endosome	IDA	Interproscan
CC	GO:0005794	Golgi apparatus	IDA	Interproscan
CC	GO:0005802	trans-Golgi network	IDA	Interproscan
CC	GO:0005840	ribosome	ISS	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006220	pyrimidine nucleotide metabolic process	None	Extended
BP	GO:0006221	pyrimidine nucleotide biosynthetic process	None	Extended
BP	GO:0006412	translation	ISS	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	None	Extended
BP	GO:0009218	pyrimidine ribonucleotide metabolic process	None	Extended
BP	GO:0009220	pyrimidine ribonucleotide biosynthetic process	RCA	Interproscan
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009260	ribonucleotide biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
CC	GO:0031410	cytoplasmic vesicle	None	Extended
CC	GO:0031982	vesicle	None	Extended
CC	GO:0031984	organelle subcompartment	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046390	ribose phosphate biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072527	pyrimidine-containing compound metabolic process	None	Extended
BP	GO:0072528	pyrimidine-containing compound biosynthetic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0097708	intracellular vesicle	None	Extended
CC	GO:0098791	Golgi apparatus subcompartment	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901137	carbohydrate derivative biosynthetic process	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR005324	Ribosomal_S5_C	436	504
IPR013810	Ribosomal_S5_N	360	422

External Links

No external refs found!

AT1G64880

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation