Solyc02g071040.3.1


Description : starch synthase (SSIV)


Gene families : OG_01_0000161 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000161_tree ,
OG_02_0002023 (LandPlants) Phylogenetic Tree(s): OG_02_0002023_tree ,
OG_03_0007551 (SeedPlants) Phylogenetic Tree(s): OG_03_0007551_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g071040.3.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00164200 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.03 Archaeplastida
AMTR_s00100p00051890 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.04 Archaeplastida
AT1G11720 ATSS3, SS3 starch synthase 3 0.06 Archaeplastida
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.07 Archaeplastida
Gb_31910 No alias starch synthase (SSIII) 0.03 Archaeplastida
LOC_Os04g53310.1 No alias starch synthase (SSIII) 0.02 Archaeplastida
MA_10428935g0010 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 Archaeplastida
MA_10430152g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_64002g0010 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.05 Archaeplastida
Pp3c7_22420V3.1 No alias starch synthase 4 0.03 Archaeplastida
Zm00001e027473_P001 No alias starch synthase (SSIV) 0.03 Archaeplastida
Zm00001e036436_P004 No alias starch synthase (SSI) 0.03 Archaeplastida
AMTR_s00033p00039610 evm_27.TU.AmTr_v1... Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 LandPlants
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.07 LandPlants
MA_10430152g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_64002g0010 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.04 LandPlants
Pp3c7_22420V3.1 No alias starch synthase 4 0.03 LandPlants
AMTR_s00189p00041140 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 SeedPlants
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.07 SeedPlants
MA_10430152g0010 No alias no hits & (original description: none) 0.03 SeedPlants
MA_64002g0010 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 803 954
IPR013534 Starch_synth_cat_dom 505 745
No external refs found!