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  5. Solyc02g071040.3.1

Solyc02g071040.3.1


Description : starch synthase (SSIV)


Gene families : OG_01_0000161 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000161_tree ,
OG_02_0002023 (LandPlants) Phylogenetic Tree(s): OG_02_0002023_tree ,
OG_03_0007551 (SeedPlants) Phylogenetic Tree(s): OG_03_0007551_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g071040.3.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00164200 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.03 Archaeplastida
AMTR_s00100p00051890 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.04 Archaeplastida
AT1G11720 ATSS3, SS3 starch synthase 3 0.06 Archaeplastida
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.07 Archaeplastida
Gb_31910 No alias starch synthase (SSIII) 0.03 Archaeplastida
LOC_Os04g53310.1 No alias starch synthase (SSIII) 0.02 Archaeplastida
MA_10428935g0010 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.03 Archaeplastida
MA_10430152g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_64002g0010 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.05 Archaeplastida
Pp3c7_22420V3.1 No alias starch synthase 4 0.03 Archaeplastida
Zm00001e027473_P001 No alias starch synthase (SSIV) 0.03 Archaeplastida
Zm00001e036436_P004 No alias starch synthase (SSI) 0.03 Archaeplastida
AMTR_s00033p00039610 evm_27.TU.AmTr_v1... Probable starch synthase 4, chloroplastic/amyloplastic... 0.02 LandPlants
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.07 LandPlants
MA_10430152g0010 No alias no hits & (original description: none) 0.03 LandPlants
MA_64002g0010 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.04 LandPlants
Pp3c7_22420V3.1 No alias starch synthase 4 0.03 LandPlants
AMTR_s00189p00041140 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 SeedPlants
AT4G18240 ATSS4, SS4, SSIV starch synthase 4 0.07 SeedPlants
MA_10430152g0010 No alias no hits & (original description: none) 0.03 SeedPlants
MA_64002g0010 No alias Probable starch synthase 4, chloroplastic/amyloplastic... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001296 Glyco_trans_1 803 954
IPR013534 Starch_synth_cat_dom 505 745
No external refs found!