Solyc02g068890.3.1


Description : Pentatricopeptide repeat-containing protein At4g19890 OS=Arabidopsis thaliana (sp|p0c8q3|pp326_arath : 813.0)


Gene families : OG_01_0010095 (Archaeplastida) Phylogenetic Tree(s): OG_01_0010095_tree ,
OG_02_0010129 (LandPlants) Phylogenetic Tree(s): OG_02_0010129_tree ,
OG_03_0008802 (SeedPlants) Phylogenetic Tree(s): OG_03_0008802_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g068890.3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AT4G19890 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 Archaeplastida
Gb_23241 No alias Pentatricopeptide repeat-containing protein At4g19890... 0.02 Archaeplastida
Zm00001e021197_P002 No alias Pentatricopeptide repeat-containing protein At4g19890... 0.04 Archaeplastida
AT4G19890 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 LandPlants
Gb_23241 No alias Pentatricopeptide repeat-containing protein At4g19890... 0.02 LandPlants
Zm00001e021197_P002 No alias Pentatricopeptide repeat-containing protein At4g19890... 0.04 LandPlants
AT4G19890 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.05 SeedPlants
Gb_23241 No alias Pentatricopeptide repeat-containing protein At4g19890... 0.02 SeedPlants
LOC_Os11g39360.2 No alias Pentatricopeptide repeat-containing protein At4g19890... 0.02 SeedPlants
Zm00001e021197_P002 No alias Pentatricopeptide repeat-containing protein At4g19890... 0.04 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 432 462
IPR002885 Pentatricopeptide_repeat 471 520
IPR002885 Pentatricopeptide_repeat 545 590
IPR002885 Pentatricopeptide_repeat 366 415
IPR002885 Pentatricopeptide_repeat 295 344
IPR002885 Pentatricopeptide_repeat 162 188
IPR002885 Pentatricopeptide_repeat 195 223
IPR002885 Pentatricopeptide_repeat 264 293
IPR002885 Pentatricopeptide_repeat 230 258
No external refs found!