AT1G64550 (GCN3, ATGCN3)


Aliases : GCN3, ATGCN3

Description : general control non-repressible 3


Gene families : OG_01_0001462 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001462_tree ,
OG_02_0008230 (LandPlants) Phylogenetic Tree(s): OG_02_0008230_tree ,
OG_03_0010656 (SeedPlants) Phylogenetic Tree(s): OG_03_0010656_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G64550
Cluster HCCA: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000383.51 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Cpa|evm.model.tig00020629.98 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
Cre01.g023787 No alias ABC transporter F family member 1 OS=Arabidopsis thaliana 0.05 Archaeplastida
Cre11.g478128 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01019609001 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.05 Archaeplastida
LOC_Os02g58020.1 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.04 Archaeplastida
MA_8312073g0010 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.03 Archaeplastida
Mp7g18200.1 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.11 Archaeplastida
Pp3c2_12550V3.1 No alias ABC transporter family protein 0.02 Archaeplastida
Pp3c3_23080V3.1 No alias general control non-repressible 3 0.08 Archaeplastida
Smo175495 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.03 Archaeplastida
Zm00001e016263_P001 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.05 Archaeplastida
Zm00001e017809_P001 No alias ABC transporter F family member 1 OS=Arabidopsis... 0.03 Archaeplastida
GSVIVT01019609001 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.04 LandPlants
LOC_Os02g58020.1 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.03 LandPlants
MA_8312073g0010 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.03 LandPlants
Mp7g18200.1 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.09 LandPlants
Pp3c3_23080V3.1 No alias general control non-repressible 3 0.06 LandPlants
Smo175495 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 LandPlants
Zm00001e016263_P001 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.04 LandPlants
AMTR_s00009p00263550 evm_27.TU.AmTr_v1... ABC transporter F family member 3 OS=Arabidopsis thaliana 0.02 SeedPlants
GSVIVT01019609001 No alias ABC transporter F family member 3 OS=Arabidopsis thaliana 0.04 SeedPlants
LOC_Os02g58020.1 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.03 SeedPlants
MA_8312073g0010 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.03 SeedPlants
Zm00001e016263_P001 No alias ABC transporter F family member 3 OS=Arabidopsis... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005215 transporter activity ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006094 gluconeogenesis RCA Interproscan
BP GO:0006096 glycolytic process RCA Interproscan
BP GO:0006406 mRNA export from nucleus RCA Interproscan
BP GO:0006606 protein import into nucleus RCA Interproscan
BP GO:0007010 cytoskeleton organization RCA Interproscan
BP GO:0009651 response to salt stress RCA Interproscan
BP GO:0010498 proteasomal protein catabolic process RCA Interproscan
BP GO:0042742 defense response to bacterium IMP Interproscan
BP GO:0046686 response to cadmium ion IEP Interproscan
BP GO:0046686 response to cadmium ion RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003439 ABC_transporter-like 521 651
IPR003439 ABC_transporter-like 194 368
IPR032781 ABC_tran_Xtn 407 488
No external refs found!