Solyc02g067960.3.1


Description : transcription factor (mTERF)


Gene families : OG_01_0000097 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000097_tree ,
OG_02_0000048 (LandPlants) Phylogenetic Tree(s): OG_02_0000048_tree ,
OG_03_0013813 (SeedPlants) Phylogenetic Tree(s): OG_03_0013813_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g067960.3.1
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.05 Archaeplastida
AMTR_s00010p00255890 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 Archaeplastida
AMTR_s00126p00036130 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AMTR_s00126p00036170 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.03 Archaeplastida
AT5G07900 No alias Mitochondrial transcription termination factor family protein 0.03 Archaeplastida
Cpa|evm.model.tig00001304.7 No alias RNA biosynthesis.organelle... 0.01 Archaeplastida
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.06 Archaeplastida
GSVIVT01028380001 No alias RNA biosynthesis.organelle... 0.03 Archaeplastida
Gb_07257 No alias TAC15 cofactor of plastid-encoded RNA polymerase.... 0.04 Archaeplastida
Gb_15878 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_23054 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_26175 No alias transcription factor (mTERF) 0.04 Archaeplastida
Gb_26176 No alias transcription factor (mTERF) 0.04 Archaeplastida
LOC_Os02g51450.2 No alias transcription factor (mTERF) 0.03 Archaeplastida
LOC_Os04g54510.1 No alias transcription factor (mTERF) 0.03 Archaeplastida
MA_493420g0010 No alias transcription factor (mTERF) 0.06 Archaeplastida
MA_7539255g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e010589_P001 No alias transcription factor (mTERF) 0.03 Archaeplastida
AMTR_s00010p00236880 evm_27.TU.AmTr_v1... RNA biosynthesis.organelle... 0.04 LandPlants
GSVIVT01022213001 No alias RNA biosynthesis.organelle... 0.06 LandPlants
GSVIVT01028380001 No alias RNA biosynthesis.organelle... 0.03 LandPlants
Gb_03849 No alias transcription factor (mTERF) 0.03 LandPlants
Gb_12368 No alias transcription factor (mTERF) 0.03 LandPlants
Gb_15878 No alias transcription factor (mTERF) 0.02 LandPlants
Gb_23054 No alias transcription factor (mTERF) 0.04 LandPlants
Gb_26175 No alias transcription factor (mTERF) 0.03 LandPlants
Gb_26176 No alias transcription factor (mTERF) 0.04 LandPlants
MA_192398g0010 No alias transcription factor (mTERF) 0.02 LandPlants
MA_493420g0010 No alias transcription factor (mTERF) 0.05 LandPlants
MA_7539255g0010 No alias no hits & (original description: none) 0.05 LandPlants
MA_81581g0010 No alias transcription factor (mTERF) 0.02 LandPlants
MA_92135g0010 No alias transcription factor (mTERF) 0.03 LandPlants
Smo410501 No alias RNA biosynthesis.organelle... 0.02 LandPlants
Solyc04g051880.3.1 No alias transcription factor (mTERF) 0.04 LandPlants
Zm00001e010589_P001 No alias transcription factor (mTERF) 0.03 LandPlants
GSVIVT01036787001 No alias RNA biosynthesis.organelle... 0.04 SeedPlants
Gb_15878 No alias transcription factor (mTERF) 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR003690 MTERF 63 137
IPR003690 MTERF 123 336
No external refs found!