AT1G63800 (UBC5)


Aliases : UBC5

Description : ubiquitin-conjugating enzyme 5


Gene families : OG_01_0001573 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001573_tree ,
OG_02_0002278 (LandPlants) Phylogenetic Tree(s): OG_02_0002278_tree ,
OG_03_0002600 (SeedPlants) Phylogenetic Tree(s): OG_03_0002600_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G63800
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00021432.10 No alias Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana 0.01 Archaeplastida
Cre01.g027200 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01026953001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Pp3c13_22880V3.1 No alias ubiquitin-conjugating enzyme 5 0.02 Archaeplastida
Solyc01g094810.3.1 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
Zm00001e000387_P004 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
Zm00001e004677_P001 No alias ubiquitin-conjugating E2 protein 0.03 Archaeplastida
Zm00001e004680_P001 No alias Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis... 0.02 Archaeplastida
GSVIVT01026953001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.05 LandPlants
Gb_18257 No alias ubiquitin-conjugating E2 protein 0.02 LandPlants
Solyc01g094810.3.1 No alias ubiquitin-conjugating E2 protein 0.02 LandPlants
Solyc10g012240.3.1 No alias ubiquitin-conjugating E2 protein 0.02 LandPlants
GSVIVT01026953001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 SeedPlants
Gb_18257 No alias ubiquitin-conjugating E2 protein 0.02 SeedPlants
Solyc10g012240.3.1 No alias ubiquitin-conjugating E2 protein 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IDA Interproscan
MF GO:0004842 ubiquitin-protein transferase activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005829 cytosol IDA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process IDA Interproscan
BP GO:0006511 ubiquitin-dependent protein catabolic process TAS Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 10 142
No external refs found!