AT1G63800 (UBC5)

Aliases : UBC5

Description : ubiquitin-conjugating enzyme 5

Gene families : OG_01_0001573 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001573_tree ,
OG_02_0002278 (LandPlants) Phylogenetic Tree(s): OG_02_0002278_tree ,
OG_03_0002600 (SeedPlants) Phylogenetic Tree(s): OG_03_0002600_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G63800
Cluster	HCCA: Cluster_180

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00021432.10	No alias	Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis thaliana	0.01	Archaeplastida
Cre01.g027200	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
GSVIVT01026953001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	Archaeplastida
Pp3c13_22880V3.1	No alias	ubiquitin-conjugating enzyme 5	0.02	Archaeplastida
Solyc01g094810.3.1	No alias	ubiquitin-conjugating E2 protein	0.03	Archaeplastida
Zm00001e000387_P004	No alias	ubiquitin-conjugating E2 protein	0.03	Archaeplastida
Zm00001e004677_P001	No alias	ubiquitin-conjugating E2 protein	0.03	Archaeplastida
Zm00001e004680_P001	No alias	Ubiquitin-conjugating enzyme E2 5 OS=Arabidopsis...	0.02	Archaeplastida
GSVIVT01026953001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.05	LandPlants
Gb_18257	No alias	ubiquitin-conjugating E2 protein	0.02	LandPlants
Solyc01g094810.3.1	No alias	ubiquitin-conjugating E2 protein	0.02	LandPlants
Solyc10g012240.3.1	No alias	ubiquitin-conjugating E2 protein	0.02	LandPlants
GSVIVT01026953001	No alias	Protein degradation.peptide tagging.Ubiquitin...	0.04	SeedPlants
Gb_18257	No alias	ubiquitin-conjugating E2 protein	0.02	SeedPlants
Solyc10g012240.3.1	No alias	ubiquitin-conjugating E2 protein	0.02	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	IDA	Interproscan
MF	GO:0004842	ubiquitin-protein transferase activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IDA	Interproscan
BP	GO:0006511	ubiquitin-dependent protein catabolic process	TAS	Interproscan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000608	UBQ-conjugat_E2	10	142

External Links

No external refs found!

AT1G63800 (UBC5)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation