Solyc02g022830.3.1


Description : DNA primase and helicase (TWINKLE)


Gene families : OG_01_0001997 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001997_tree ,
OG_02_0003025 (LandPlants) Phylogenetic Tree(s): OG_02_0003025_tree ,
OG_03_0003486 (SeedPlants) Phylogenetic Tree(s): OG_03_0003486_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc02g022830.3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00032p00034370 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA replication.DNA... 0.03 Archaeplastida
AT1G30680 No alias toprim domain-containing protein 0.03 Archaeplastida
GSVIVT01008778001 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.05 Archaeplastida
GSVIVT01021728001 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.03 Archaeplastida
LOC_Os06g45980.1 No alias DNA primase and helicase (TWINKLE) 0.03 Archaeplastida
MA_219884g0010 No alias Twinkle homolog protein, chloroplastic/mitochondrial... 0.02 Archaeplastida
Mp7g12970.1 No alias DNA primase and helicase (TWINKLE) 0.03 Archaeplastida
Zm00001e030349_P002 No alias DNA primase and helicase (TWINKLE) 0.08 Archaeplastida
AMTR_s00032p00034370 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA replication.DNA... 0.03 LandPlants
AT1G30680 No alias toprim domain-containing protein 0.03 LandPlants
GSVIVT01008778001 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.04 LandPlants
GSVIVT01021728001 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.03 LandPlants
LOC_Os06g45980.1 No alias DNA primase and helicase (TWINKLE) 0.03 LandPlants
MA_219884g0010 No alias Twinkle homolog protein, chloroplastic/mitochondrial... 0.02 LandPlants
Mp7g12970.1 No alias DNA primase and helicase (TWINKLE) 0.03 LandPlants
Zm00001e030349_P002 No alias DNA primase and helicase (TWINKLE) 0.06 LandPlants
AMTR_s00032p00034370 evm_27.TU.AmTr_v1... Cell cycle.organelle machineries.DNA replication.DNA... 0.03 SeedPlants
GSVIVT01008778001 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.04 SeedPlants
GSVIVT01021728001 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.04 SeedPlants
LOC_Os06g45980.1 No alias DNA primase and helicase (TWINKLE) 0.04 SeedPlants
Zm00001e030349_P002 No alias DNA primase and helicase (TWINKLE) 0.06 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006260 DNA replication IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR007694 DNA_helicase_DnaB-like_C 432 674
IPR006171 TOPRIM_domain 277 369
No external refs found!