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  5. Solyc01g108310.4.1

Solyc01g108310.4.1


Description : La-related protein 6C OS=Arabidopsis thaliana (sp|q9lhl3|lrp6c_arath : 293.0)


Gene families : OG_01_0001518 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001518_tree ,
OG_02_0001117 (LandPlants) Phylogenetic Tree(s): OG_02_0001117_tree ,
OG_03_0000812 (SeedPlants) Phylogenetic Tree(s): OG_03_0000812_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g108310.4.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00169p00025570 evm_27.TU.AmTr_v1... La-related protein 6C OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G19090 No alias RNA-binding protein 0.04 Archaeplastida
LOC_Os03g36900.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os07g01260.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.06 Archaeplastida
Pp3c2_11210V3.1 No alias RNA-binding protein 0.02 Archaeplastida
Zm00001e004312_P002 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e032645_P001 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.05 Archaeplastida
AMTR_s00169p00025570 evm_27.TU.AmTr_v1... La-related protein 6C OS=Arabidopsis thaliana 0.02 LandPlants
AT3G19090 No alias RNA-binding protein 0.04 LandPlants
GSVIVT01021437001 No alias La-related protein 6A OS=Arabidopsis thaliana 0.02 LandPlants
LOC_Os03g36900.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.03 LandPlants
LOC_Os07g01260.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.05 LandPlants
Pp3c2_11210V3.1 No alias RNA-binding protein 0.02 LandPlants
Zm00001e004312_P002 No alias no hits & (original description: none) 0.03 LandPlants
Zm00001e032645_P001 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.04 LandPlants
AT3G19090 No alias RNA-binding protein 0.03 SeedPlants
LOC_Os03g36900.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.03 SeedPlants
LOC_Os07g01260.1 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.04 SeedPlants
Zm00001e004312_P002 No alias no hits & (original description: none) 0.02 SeedPlants
Zm00001e032645_P001 No alias La-related protein 6C OS=Arabidopsis thaliana... 0.04 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006630 La_HTH 109 165
IPR000504 RRM_dom 202 270
IPR009818 Ataxin-2_C 26 42
No external refs found!