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  5. Solyc01g108160.3.1

Solyc01g108160.3.1


Description : component ATG2 of autophagosome ATG9-2-18 membrane shuttling complex


Gene families : OG_01_0005528 (Archaeplastida) Phylogenetic Tree(s): OG_01_0005528_tree ,
OG_02_0004882 (LandPlants) Phylogenetic Tree(s): OG_02_0004882_tree ,
OG_03_0006196 (SeedPlants) Phylogenetic Tree(s): OG_03_0006196_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g108160.3.1
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00126p00106330 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.03 Archaeplastida
Cre09.g408950 No alias No description available 0.04 Archaeplastida
Gb_39311 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
LOC_Os06g15700.1 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.08 Archaeplastida
MA_10433793g0030 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
Zm00001e030944_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 Archaeplastida
Zm00001e036789_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 Archaeplastida
AMTR_s00126p00106330 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 LandPlants
GSVIVT01031759001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 LandPlants
LOC_Os06g15700.1 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.08 LandPlants
MA_10433793g0030 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
Zm00001e030944_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 LandPlants
Zm00001e036789_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 LandPlants
AMTR_s00126p00106330 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 SeedPlants
GSVIVT01031759001 No alias Vesicle trafficking.autophagosome formation.ATG9-2-18... 0.02 SeedPlants
LOC_Os06g15700.1 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.08 SeedPlants
MA_10433793g0030 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants
Zm00001e030944_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.02 SeedPlants
Zm00001e036789_P001 No alias component ATG2 of autophagosome ATG9-2-18 membrane... 0.05 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR026854 VPS13-like_N 18 110
IPR015412 Autophagy-rel_C 1878 1972
No external refs found!