Solyc01g106020.3.1


Description : RNA-binding KH domain-containing protein RCF3 OS=Arabidopsis thaliana (sp|q8w4b1|rcf3_arath : 183.0)


Gene families : OG_01_0000393 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000393_tree ,
OG_02_0000380 (LandPlants) Phylogenetic Tree(s): OG_02_0000380_tree ,
OG_03_0002279 (SeedPlants) Phylogenetic Tree(s): OG_03_0002279_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g106020.3.1
Cluster HCCA: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265700 evm_27.TU.AmTr_v1... RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
AMTR_s00033p00116200 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.03 Archaeplastida
AMTR_s00092p00116010 evm_27.TU.AmTr_v1... KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01021523001 No alias KH domain-containing protein At4g18375 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_37521 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os06g23460.1 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
LOC_Os09g32300.1 No alias KH domain-containing protein HEN4 OS=Arabidopsis... 0.02 Archaeplastida
MA_10430861g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 Archaeplastida
MA_10433640g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 Archaeplastida
MA_12604g0010 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
MA_20325g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 Archaeplastida
MA_3715g0020 No alias RNA-binding KH domain-containing protein RCF3... 0.02 Archaeplastida
Smo73985 No alias RNA-binding KH domain-containing protein RCF3... 0.03 Archaeplastida
Zm00001e039986_P003 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.03 Archaeplastida
AMTR_s00033p00116200 evm_27.TU.AmTr_v1... KH domain-containing protein HEN4 OS=Arabidopsis thaliana 0.03 LandPlants
Gb_37521 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 LandPlants
LOC_Os06g23460.1 No alias RNA-binding KH domain-containing protein RCF3... 0.02 LandPlants
LOC_Os09g32300.1 No alias KH domain-containing protein HEN4 OS=Arabidopsis... 0.02 LandPlants
MA_10430861g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 LandPlants
MA_20325g0010 No alias KH domain-containing protein At4g18375 OS=Arabidopsis... 0.02 LandPlants
Gb_03724 No alias RNA-binding KH domain-containing protein RCF3... 0.02 SeedPlants
LOC_Os09g32300.1 No alias KH domain-containing protein HEN4 OS=Arabidopsis... 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR004088 KH_dom_type_1 42 96
IPR004088 KH_dom_type_1 577 640
IPR004088 KH_dom_type_1 302 350
IPR004088 KH_dom_type_1 388 451
IPR004088 KH_dom_type_1 153 219
No external refs found!