AT1G62780


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, chloroplast stroma; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; Has 94 Blast hits to 94 proteins in 35 species: Archae - 6; Bacteria - 10; Metazoa - 21; Fungi - 2; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).


Gene families : OG_01_0007361 (Archaeplastida) Phylogenetic Tree(s): OG_01_0007361_tree ,
OG_02_0007022 (LandPlants) Phylogenetic Tree(s): OG_02_0007022_tree ,
OG_03_0008974 (SeedPlants) Phylogenetic Tree(s): OG_03_0008974_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G62780
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
Cre13.g579550 No alias No description available 0.06 Archaeplastida
GSVIVT01006029001 No alias No description available 0.03 Archaeplastida
Mp7g04230.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Pp3c10_11840V3.1 No alias No annotation 0.05 Archaeplastida
Solyc08g079240.4.1 No alias no hits & (original description: none) 0.09 Archaeplastida
GSVIVT01006029001 No alias No description available 0.03 LandPlants
Gb_29626 No alias no hits & (original description: none) 0.01 LandPlants
Mp7g04230.1 No alias no hits & (original description: none) 0.04 LandPlants
Pp3c10_11840V3.1 No alias No annotation 0.04 LandPlants
Solyc08g079240.4.1 No alias no hits & (original description: none) 0.08 LandPlants
Zm00001e032854_P001 No alias no hits & (original description: none) 0.02 LandPlants
GSVIVT01006029001 No alias No description available 0.03 SeedPlants
Gb_29626 No alias no hits & (original description: none) 0.01 SeedPlants
Solyc08g079240.4.1 No alias no hits & (original description: none) 0.08 SeedPlants
Zm00001e032854_P001 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source
BP GO:0000023 maltose metabolic process RCA Interproscan
MF GO:0003674 molecular_function ND Interproscan
BP GO:0006098 pentose-phosphate shunt RCA Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009570 chloroplast stroma IDA Interproscan
BP GO:0009902 chloroplast relocation RCA Interproscan
BP GO:0010027 thylakoid membrane organization RCA Interproscan
BP GO:0019252 starch biosynthetic process RCA Interproscan
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway RCA Interproscan
BP GO:0034660 ncRNA metabolic process RCA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!