Solyc01g100050.3.1


Description : transcriptional repressor (TPL). transcriptional co-repressor (TPL/TPR)


Gene families : OG_01_0000601 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000601_tree ,
OG_02_0000851 (LandPlants) Phylogenetic Tree(s): OG_02_0000851_tree ,
OG_03_0000882 (SeedPlants) Phylogenetic Tree(s): OG_03_0000882_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g100050.3.1
Cluster HCCA: Cluster_268

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00048p00159380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 Archaeplastida
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 Archaeplastida
GSVIVT01015571001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 Archaeplastida
GSVIVT01017343001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.07 Archaeplastida
LOC_Os01g15020.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 Archaeplastida
MA_16979g0020 No alias Topless-related protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_33469g0010 No alias Protein TPR2 OS=Oryza sativa subsp. japonica... 0.02 Archaeplastida
Zm00001e038558_P003 No alias transcriptional repressor (TPL). transcriptional... 0.02 Archaeplastida
AMTR_s00048p00159380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 LandPlants
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 LandPlants
GSVIVT01015571001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 LandPlants
GSVIVT01017343001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.07 LandPlants
LOC_Os01g15020.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 LandPlants
Zm00001e001080_P001 No alias transcriptional repressor (TPL). transcriptional... 0.02 LandPlants
AMTR_s00048p00159380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 SeedPlants
AMTR_s00051p00079490 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional repression.TPL/TPR... 0.03 SeedPlants
GSVIVT01015571001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.04 SeedPlants
GSVIVT01017343001 No alias RNA biosynthesis.transcriptional repression.TPL/TPR... 0.07 SeedPlants
Gb_37153 No alias transcriptional repressor (TPL). transcriptional... 0.02 SeedPlants
LOC_Os01g15020.1 No alias transcriptional repressor (TPL). transcriptional... 0.03 SeedPlants
Zm00001e001080_P001 No alias transcriptional repressor (TPL). transcriptional... 0.02 SeedPlants
Zm00001e038558_P003 No alias transcriptional repressor (TPL). transcriptional... 0.01 SeedPlants

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR001680 WD40_repeat 913 946
IPR001680 WD40_repeat 451 484
No external refs found!