AT1G62350

Description : Pentatricopeptide repeat (PPR) superfamily protein

Gene families : OG_01_0000306 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000306_tree ,
OG_02_0000732 (LandPlants) Phylogenetic Tree(s): OG_02_0000732_tree ,
OG_03_0002392 (SeedPlants) Phylogenetic Tree(s): OG_03_0002392_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G62350
Cluster	HCCA: Cluster_7

Target	Alias	Description	ECC score	Gene Family Method
AT3G53170	No alias	Tetratricopeptide repeat (TPR)-like superfamily protein	0.04	Archaeplastida
GSVIVT01032162001	No alias	Pentatricopeptide repeat-containing protein At3g53170...	0.03	Archaeplastida
Gb_14850	No alias	Pentatricopeptide repeat-containing protein At2g13600...	0.04	Archaeplastida
LOC_Os02g51480.1	No alias	Pentatricopeptide repeat-containing protein PPR5...	0.03	Archaeplastida
LOC_Os03g19650.3	No alias	Pentatricopeptide repeat-containing protein At3g06430,...	0.03	Archaeplastida
MA_946756g0010	No alias	Protein THYLAKOID ASSEMBLY 8-like, chloroplastic...	0.04	Archaeplastida
Smo119487	No alias	Pentatricopeptide repeat-containing protein At1g19720...	0.04	Archaeplastida
Smo135826	No alias	Pentatricopeptide repeat-containing protein At4g39620,...	0.04	Archaeplastida
Solyc09g092360.3.1	No alias	THA8 plastidial RNA splicing factor	0.03	Archaeplastida
MA_946756g0010	No alias	Protein THYLAKOID ASSEMBLY 8-like, chloroplastic...	0.04	LandPlants
Solyc09g092360.3.1	No alias	THA8 plastidial RNA splicing factor	0.03	LandPlants
Solyc09g092360.3.1	No alias	THA8 plastidial RNA splicing factor	0.03	SeedPlants

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	ND	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005622	intracellular anatomical structure	None	Extended
CC	GO:0005739	mitochondrion	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR002885	Pentatricopeptide_repeat	108	135
IPR002885	Pentatricopeptide_repeat	74	100

External Links

No external refs found!