AT1G62350


Description : Pentatricopeptide repeat (PPR) superfamily protein


Gene families : OG_01_0000306 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000306_tree ,
OG_02_0000732 (LandPlants) Phylogenetic Tree(s): OG_02_0000732_tree ,
OG_03_0002392 (SeedPlants) Phylogenetic Tree(s): OG_03_0002392_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G62350
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AT3G53170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 Archaeplastida
GSVIVT01032162001 No alias Pentatricopeptide repeat-containing protein At3g53170... 0.03 Archaeplastida
Gb_14850 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 Archaeplastida
LOC_Os02g51480.1 No alias Pentatricopeptide repeat-containing protein PPR5... 0.03 Archaeplastida
LOC_Os03g19650.3 No alias Pentatricopeptide repeat-containing protein At3g06430,... 0.03 Archaeplastida
MA_946756g0010 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.04 Archaeplastida
Smo119487 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.04 Archaeplastida
Smo135826 No alias Pentatricopeptide repeat-containing protein At4g39620,... 0.04 Archaeplastida
Solyc09g092360.3.1 No alias THA8 plastidial RNA splicing factor 0.03 Archaeplastida
MA_946756g0010 No alias Protein THYLAKOID ASSEMBLY 8-like, chloroplastic... 0.04 LandPlants
Solyc09g092360.3.1 No alias THA8 plastidial RNA splicing factor 0.03 LandPlants
Solyc09g092360.3.1 No alias THA8 plastidial RNA splicing factor 0.03 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 108 135
IPR002885 Pentatricopeptide_repeat 74 100
No external refs found!