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  5. Solyc01g096840.3.1

Solyc01g096840.3.1


Description : accessory component EDE1 of Augmin gamma-TuRC recruiting complex


Gene families : OG_01_0000642 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000642_tree ,
OG_02_0000381 (LandPlants) Phylogenetic Tree(s): OG_02_0000381_tree ,
OG_03_0000548 (SeedPlants) Phylogenetic Tree(s): OG_03_0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g096840.3.1
Cluster HCCA: Cluster_65

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00037320 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule Tubulin... 0.1 Archaeplastida
LOC_Os09g11440.2 No alias Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_866921g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Mp1g11080.1 No alias AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Pp3c23_22010V3.1 No alias Family of unknown function (DUF566) 0.05 Archaeplastida
Pp3c8_24940V3.1 No alias Family of unknown function (DUF566) 0.02 Archaeplastida
Zm00001e018954_P001 No alias Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
AMTR_s00061p00037320 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule Tubulin... 0.07 LandPlants
MA_866921g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp1g11080.1 No alias AUGMIN subunit 8 OS=Arabidopsis thaliana... 0.02 LandPlants
Pp3c23_22010V3.1 No alias Family of unknown function (DUF566) 0.02 LandPlants
Zm00001e018954_P001 No alias Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.03 LandPlants
AMTR_s00061p00037320 evm_27.TU.AmTr_v1... Cytoskeleton.microtubular network.microtubule Tubulin... 0.07 SeedPlants
Zm00001e018954_P001 No alias Protein ENDOSPERM DEFECTIVE 1 OS=Arabidopsis thaliana... 0.03 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007573 QWRF 264 550
No external refs found!