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  5. Solyc01g095480.4.1

Solyc01g095480.4.1


Description : component RRP41 of exosome EXO9 core complex


Gene families : OG_01_0001779 (Archaeplastida) Phylogenetic Tree(s): OG_01_0001779_tree ,
OG_02_0008448 (LandPlants) Phylogenetic Tree(s): OG_02_0008448_tree ,
OG_03_0009993 (SeedPlants) Phylogenetic Tree(s): OG_03_0009993_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g095480.4.1
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT3G61620 RRP41 3'-5'-exoribonuclease family protein 0.06 Archaeplastida
Cre06.g284500 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.03 Archaeplastida
Cre17.g697624 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.04 Archaeplastida
GSVIVT01027043001 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.03 Archaeplastida
LOC_Os03g62720.1 No alias component MTR3/RRP41L of exosome EXO9 core complex 0.03 Archaeplastida
LOC_Os08g02360.1 No alias component MTR3/RRP41L of exosome EXO9 core complex 0.03 Archaeplastida
LOC_Os09g07820.1 No alias component RRP41 of exosome EXO9 core complex 0.05 Archaeplastida
MA_7833167g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp2g19580.1 No alias component MTR3/RRP41L of exosome EXO9 core complex 0.03 Archaeplastida
Mp4g24080.1 No alias component RRP41 of exosome EXO9 core complex 0.03 Archaeplastida
Pp3c3_18310V3.1 No alias 3\-5\-exoribonuclease family protein 0.02 Archaeplastida
Pp3s48_50V3.1 No alias 3\-5\-exoribonuclease family protein 0.03 Archaeplastida
AT3G61620 RRP41 3'-5'-exoribonuclease family protein 0.06 LandPlants
GSVIVT01027043001 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.03 LandPlants
LOC_Os09g07820.1 No alias component RRP41 of exosome EXO9 core complex 0.05 LandPlants
MA_7833167g0010 No alias no hits & (original description: none) 0.02 LandPlants
Mp4g24080.1 No alias component RRP41 of exosome EXO9 core complex 0.03 LandPlants
Pp3s48_50V3.1 No alias 3\-5\-exoribonuclease family protein 0.03 LandPlants
AT3G61620 RRP41 3'-5'-exoribonuclease family protein 0.05 SeedPlants
GSVIVT01027043001 No alias RNA processing.RNA decay.exosome complex.EXO9 core... 0.03 SeedPlants
LOC_Os09g07820.1 No alias component RRP41 of exosome EXO9 core complex 0.05 SeedPlants
MA_7833167g0010 No alias no hits & (original description: none) 0.02 SeedPlants

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015847 ExoRNase_PH_dom2 152 215
IPR001247 ExoRNase_PH_dom1 18 148
No external refs found!