Solyc01g088100.4.1


Description : C3H zinc finger transcription factor


Gene families : OG_01_0000743 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000743_tree ,
OG_02_0000692 (LandPlants) Phylogenetic Tree(s): OG_02_0000692_tree ,
OG_03_0001988 (SeedPlants) Phylogenetic Tree(s): OG_03_0001988_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc01g088100.4.1
Cluster HCCA: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01030048001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 Archaeplastida
LOC_Os07g48410.1 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
Zm00001e020869_P004 No alias C3H zinc finger transcription factor 0.05 Archaeplastida
Zm00001e024022_P001 No alias C3H zinc finger transcription factor 0.03 Archaeplastida
GSVIVT01001467001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 LandPlants
LOC_Os07g48410.1 No alias C3H zinc finger transcription factor 0.01 LandPlants
Zm00001e020869_P004 No alias C3H zinc finger transcription factor 0.05 LandPlants
GSVIVT01001467001 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 SeedPlants
LOC_Os07g48410.1 No alias C3H zinc finger transcription factor 0.01 SeedPlants
Zm00001e020869_P004 No alias C3H zinc finger transcription factor 0.03 SeedPlants
Zm00001e024022_P001 No alias C3H zinc finger transcription factor 0.01 SeedPlants
Zm00001e038256_P001 No alias C3H zinc finger transcription factor 0.02 SeedPlants

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR000504 RRM_dom 107 152
No external refs found!